Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PP_0457 |
Symbol | rplB |
ID | 1044203 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida KT2440 |
Kingdom | Bacteria |
Replicon accession | NC_002947 |
Strand | + |
Start bp | 552612 |
End bp | 553436 |
Gene Length | 825 bp |
Protein Length | 274 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 637143843 |
Product | 50S ribosomal protein L2 |
Protein accession | NP_742623 |
Protein GI | 26987198 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0090] Ribosomal protein L2 |
TIGRFAM ID | [TIGR01171] ribosomal protein L2, bacterial/organellar |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.271317 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 0 |
Fosmid unclonability p-value | 0.000000209689 |
Fosmid Hitchhiker | No |
Fosmid clonability | unclonable |
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Sequence |
Gene sequence | ATGGCAATCG TTAAATGCAA ACCGACTTCC CCTGGCCGCC GTTTCGTGGT CAAGGTGGTC AACAAGGAGC TGCACAAAGG CGCTCCTCAC GCACCGCTGA TCGAGAAAAA ATCGAAGTCT GGTGGTCGTA ACAACAATGG CCGCATTACC ACTCGTCACG TTGGTGGTGG TCACAAGCAG CATTACCGTC TGGTCGACTT CCGTCGCAAC GACAAAGATG GCATTCCAGC CACTGTCGAG CGTATCGAAT ACGATCCAAA CCGTACTGCT CACATCGCCC TGCTGTGCTA CGCAGACGGT GAGCGTCGCT ACATCATCGC GCCTAAAGGC GTGAGCGCTG GCGACCAGCT GATCGCAGGT GCCCTGGCCC CAATCAAGGC CGGTAACTCC CTGCAGCTGC GCAACATTCC AGTAGGTAGC ACCATTCACG GCATCGAACT GAAGCCGGGT AAAGGTGCTC AGATCGCTCG TTCCGCTGGT GCTTCGGCTC AGCTGATCGC TCGCGAAGGT GTCTACGTGA CCCTGCGTCT GCGCTCTGGT GAAATGCGTA AAGTCCTGGC TGAGTGCCGT GCGACCCTGG GCGAAGTCTC GAACTCCGAG CACAGCCTGC GTTCGCTGGG TAAAGCTGGT GCCAAACGCT GGCGCGGCGT TCGCCCAACC GTTCGTGGTG TTGCCATGAA CCCGGTTGAC CACCCACACG GTGGTGGTGA AGGTCGTACC TCCGGTGGTC GTCATCCGGT ATCGCCATGG GGCTTCCCAA CCAAGGGTGC TAAAACCCGT GGTAATAAGC GTACCGACAA CATGATCGTC CGTCGTCGCA AGTAA
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Protein sequence | MAIVKCKPTS PGRRFVVKVV NKELHKGAPH APLIEKKSKS GGRNNNGRIT TRHVGGGHKQ HYRLVDFRRN DKDGIPATVE RIEYDPNRTA HIALLCYADG ERRYIIAPKG VSAGDQLIAG ALAPIKAGNS LQLRNIPVGS TIHGIELKPG KGAQIARSAG ASAQLIAREG VYVTLRLRSG EMRKVLAECR ATLGEVSNSE HSLRSLGKAG AKRWRGVRPT VRGVAMNPVD HPHGGGEGRT SGGRHPVSPW GFPTKGAKTR GNKRTDNMIV RRRK
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