Gene PP_0455 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPP_0455 
SymbolrplD 
ID1044201 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida KT2440 
KingdomBacteria 
Replicon accessionNC_002947 
Strand
Start bp551699 
End bp552301 
Gene Length603 bp 
Protein Length200 aa 
Translation table11 
GC content57% 
IMG OID637143841 
Product50S ribosomal protein L4 
Protein accessionNP_742621 
Protein GI26987196 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0088] Ribosomal protein L4 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.035261 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000000191468 
Fosmid HitchhikerNo 
Fosmid clonabilityunclonable 
 

Sequence

Gene sequence
ATGCAACTTA ATGTAAATGA CGCTCAGGCG ATCGAAGTTT CCGAACTGAC TTTCGGTGGC 
GAATTCAACG AGACGCTGGT TCACCAAGCA GTCGTGGCCT ACATGGCCGG CGGCCGTCAG
GGCACCAAGC AGCAGAAGAC CCGTTCCGAC GTGGCTGGTG GCGGTAAGCG CCCATGGCGT
CAGAAGGGTA CTGGCCGTGC TCGTGCTGGT ACCACTCGTG GTCCGATCTG GCGTGGCGGT
GGTGTAACCT TCGCAGCTCG CCCTCAAGAT CACTCGCAAA AGCTCAACAA GAAGATGTAT
CGCGCAGCTC TGCGCTCCAT CCTCGCTGAG CTGGTGCGTA GCGACCGTCT GGTCGTGGTT
CAGGACTTCG CTGTTGAAGC ACCGAAAACC AAAGATCTGC TGAACAAGCT GAACGGCATG
GGTCTGAGCG ATGTACTGAT CGTTTCCGAC GCTGTTGATC AGAACCTGTA CCTGGCTGCT
CGTAACCTGC CGCACGTCGA CGTACGTGAC GTCCAAGGTT CCGACCCGGT CAGTCTGATC
GCATACGAGA AAGTGTTGAT CACTGTCTCG GCCGTGAAGA AATTCGAGGA GCTGCTGGGA
TGA
 
Protein sequence
MQLNVNDAQA IEVSELTFGG EFNETLVHQA VVAYMAGGRQ GTKQQKTRSD VAGGGKRPWR 
QKGTGRARAG TTRGPIWRGG GVTFAARPQD HSQKLNKKMY RAALRSILAE LVRSDRLVVV
QDFAVEAPKT KDLLNKLNGM GLSDVLIVSD AVDQNLYLAA RNLPHVDVRD VQGSDPVSLI
AYEKVLITVS AVKKFEELLG