Gene PP_0452 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPP_0452 
Symboltuf 
ID1044196 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida KT2440 
KingdomBacteria 
Replicon accessionNC_002947 
Strand
Start bp549324 
End bp550517 
Gene Length1194 bp 
Protein Length397 aa 
Translation table11 
GC content57% 
IMG OID637143838 
Productelongation factor Tu 
Protein accessionNP_742618 
Protein GI26987193 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0050] GTPases - translation elongation factors 
TIGRFAM ID[TIGR00231] small GTP-binding protein domain
[TIGR00485] translation elongation factor TU 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.536518 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000000302311 
Fosmid HitchhikerNo 
Fosmid clonabilityunclonable 
 

Sequence

Gene sequence
GTGGCTAAAG AAAAATTTGA TCGTTCCCTT CCCCACGTTA ACGTCGGCAC CATCGGCCAC 
GTTGACCACG GTAAGACCAC TCTGACCGCA GCTCTGACTC GCGTCTGCTC CGAAGTTTTC
GGTTCGGCAG TCGTTGAGTT CGACAAGATC GACTCGGCTC CGGAAGAAAA AGCGCGCGGT
ATCACCATCA ACACCGCTCA CGTCGAGTAC AACTCGAACA TTCGTCACTA CGCTCACGTT
GACTGCCCAG GTCACGCTGA CTACGTGAAG AACATGATCA CCGGTGCTGC CCAGATGGAC
GGCGCGATCC TGGTTTGCTC GGCCGCCGAT GGTCCGATGC CGCAAACCCG TGAGCACATC
CTGCTGTCCC GTCAGGTAGG CGTTCCGTAC ATCGTGGTCT TCCTGAACAA GGCCGACCTG
GTAGACGACG CTGAGCTGCT GGAACTGGTC GAGATGGAAG TTCGCGACCT GCTGTCCACC
TACGACTTCC CAGGCGACGA CACTCCGATC ATCATCGGTT CCGCTCGTAT GGCCCTGGAA
GGCAAAGACG ACAACGAAAT GGGCACTACC GCTGTCAAGA AGCTGGTAGA AACTCTGGAT
GCCTACATCC CTGAGCCAGT TCGTGCCATC GACCAGCCGT TCCTGATGCC GATCGAAGAC
GTGTTCTCGA TCTCGGGTCG TGGTACCGTT GTTACCGGTC GTATCGAGCG TGGCATCGTT
CGCGTTCAGG ATCCGCTGGA AATCGTTGGT CTGCGTGACA CCACCACCAC CACCTGCACC
GGTGTTGAGA TGTTCCGCAA GCTGCTGGAC GAAGGTCGTG CTGGCGAGAA CTGCGGCGTT
CTGCTGCGTG GTACCAAGCG TGACGACGTT GAGCGTGGCC AGGTTCTGGT CAAGCCAGGT
TCGGTCAAGC CGCACACCAA GTTCACCGCA GAAGTCTACG TCCTGTCGAA GGAAGAAGGC
GGCCGTCACA CTCCGTTCTT CAAAGGCTAC CGTCCACAGT TCTACTTCCG TACCACTGAC
GTGACCGGTA ACTGCGAACT GCCGGAAGGC GTTGAAATGG TAATGCCAGG TGACAACATT
CAGATGACTG TTACCCTGAT CAAGACCATC GCAATGGAAG ACGGTCTGCG CTTCGCTATC
CGTGAAGGCG GTCGTACCGT CGGCGCCGGC GTTGTGGCCA AAATCATCGA GTAA
 
Protein sequence
MAKEKFDRSL PHVNVGTIGH VDHGKTTLTA ALTRVCSEVF GSAVVEFDKI DSAPEEKARG 
ITINTAHVEY NSNIRHYAHV DCPGHADYVK NMITGAAQMD GAILVCSAAD GPMPQTREHI
LLSRQVGVPY IVVFLNKADL VDDAELLELV EMEVRDLLST YDFPGDDTPI IIGSARMALE
GKDDNEMGTT AVKKLVETLD AYIPEPVRAI DQPFLMPIED VFSISGRGTV VTGRIERGIV
RVQDPLEIVG LRDTTTTTCT GVEMFRKLLD EGRAGENCGV LLRGTKRDDV ERGQVLVKPG
SVKPHTKFTA EVYVLSKEEG GRHTPFFKGY RPQFYFRTTD VTGNCELPEG VEMVMPGDNI
QMTVTLIKTI AMEDGLRFAI REGGRTVGAG VVAKIIE