Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PP_0445 |
Symbol | rplJ |
ID | 1044188 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida KT2440 |
Kingdom | Bacteria |
Replicon accession | NC_002947 |
Strand | + |
Start bp | 536457 |
End bp | 536957 |
Gene Length | 501 bp |
Protein Length | 166 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 637143831 |
Product | 50S ribosomal protein L10 |
Protein accession | NP_742611 |
Protein GI | 26987186 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0244] Ribosomal protein L10 |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.470652 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 0 |
Fosmid unclonability p-value | 0.000000241771 |
Fosmid Hitchhiker | No |
Fosmid clonability | unclonable |
| |
Sequence |
Gene sequence | GTGGCAATTA AACTCGAAGA CAAGAAGGCC ATCGTCGCTG AAGTCAACGA GGCTGCCAAA GTCGCTCTGT CCGCTGTCGT GGCTGATGCC CGTGGTGTGA CTGTAAGCGC AATGACCGGA CTCCGTAAAG AGGCCCGCGA AGCTGGCGTA TACGTACGTG TAGTGCGTAA TACCCTGCTC AAGCGCGCTG TTGAAGGCAC CGAATTCTCG ATCCTCAACG ACGCGTTCAA AGGCCCGACC CTGATTGCTT TCTCCAACGA ACACCCGGGC GCTGCTGCTC GTCTGTTCAA AGAGTTCGCC AAGGGTCAGG ACAAGTTCGA GATCAAGGCA GCTGCGTTTG ACGGCAATTT CATTGCAGCG AACCAGATCG ACGTGTTGGC TACCCTGCCG ACCCGCGACG AAGCTATTGC ACGACTGATG AGCGTTATTC AAGGCGCCAC CAGCAAGCTG GCTCGTACTC TGGCAGCCAT TCGCGACCAG AAAGAAGCTA CCGCCGCCTA A
|
Protein sequence | MAIKLEDKKA IVAEVNEAAK VALSAVVADA RGVTVSAMTG LRKEAREAGV YVRVVRNTLL KRAVEGTEFS ILNDAFKGPT LIAFSNEHPG AAARLFKEFA KGQDKFEIKA AAFDGNFIAA NQIDVLATLP TRDEAIARLM SVIQGATSKL ARTLAAIRDQ KEATAA
|
| |