Gene PP_0445 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPP_0445 
SymbolrplJ 
ID1044188 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida KT2440 
KingdomBacteria 
Replicon accessionNC_002947 
Strand
Start bp536457 
End bp536957 
Gene Length501 bp 
Protein Length166 aa 
Translation table11 
GC content56% 
IMG OID637143831 
Product50S ribosomal protein L10 
Protein accessionNP_742611 
Protein GI26987186 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0244] Ribosomal protein L10 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.470652 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000000241771 
Fosmid HitchhikerNo 
Fosmid clonabilityunclonable 
 

Sequence

Gene sequence
GTGGCAATTA AACTCGAAGA CAAGAAGGCC ATCGTCGCTG AAGTCAACGA GGCTGCCAAA 
GTCGCTCTGT CCGCTGTCGT GGCTGATGCC CGTGGTGTGA CTGTAAGCGC AATGACCGGA
CTCCGTAAAG AGGCCCGCGA AGCTGGCGTA TACGTACGTG TAGTGCGTAA TACCCTGCTC
AAGCGCGCTG TTGAAGGCAC CGAATTCTCG ATCCTCAACG ACGCGTTCAA AGGCCCGACC
CTGATTGCTT TCTCCAACGA ACACCCGGGC GCTGCTGCTC GTCTGTTCAA AGAGTTCGCC
AAGGGTCAGG ACAAGTTCGA GATCAAGGCA GCTGCGTTTG ACGGCAATTT CATTGCAGCG
AACCAGATCG ACGTGTTGGC TACCCTGCCG ACCCGCGACG AAGCTATTGC ACGACTGATG
AGCGTTATTC AAGGCGCCAC CAGCAAGCTG GCTCGTACTC TGGCAGCCAT TCGCGACCAG
AAAGAAGCTA CCGCCGCCTA A
 
Protein sequence
MAIKLEDKKA IVAEVNEAAK VALSAVVADA RGVTVSAMTG LRKEAREAGV YVRVVRNTLL 
KRAVEGTEFS ILNDAFKGPT LIAFSNEHPG AAARLFKEFA KGQDKFEIKA AAFDGNFIAA
NQIDVLATLP TRDEAIARLM SVIQGATSKL ARTLAAIRDQ KEATAA