Gene PP_0441 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPP_0441 
SymbolsecE 
ID1044184 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida KT2440 
KingdomBacteria 
Replicon accessionNC_002947 
Strand
Start bp534102 
End bp534470 
Gene Length369 bp 
Protein Length122 aa 
Translation table11 
GC content56% 
IMG OID637143827 
Productpreprotein translocase subunit SecE 
Protein accessionNP_742607 
Protein GI26987182 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG0690] Preprotein translocase subunit SecE 
TIGRFAM ID[TIGR00964] preprotein translocase, SecE subunit, bacterial 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00228107 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000000275788 
Fosmid HitchhikerNo 
Fosmid clonabilityunclonable 
 

Sequence

Gene sequence
ATGACCCCCA AAACTGAAGC CCAAGAATCG CGTTTTGATC TGTTCAAGTG GCTGGCTGTA 
GTGGCTTTGG TGGTTGTTGG TGTTGTGGGT AATCAATATT ACTCCGGCTC TCCAATCCTG
TATCGCGTTC TTGTACTTCT CGTCCTTGCT GCTGTCGCGG GCTTTGTGGC TCTGCAGACT
GCGAAGGGCA AGTCGTTCTT TGCGCTGGCG AAGGAAGCTC GTACCGAGAT TCGTAAAGTC
GTGTGGCCGA CCCGCCAGGA AACCACCCAG ACCACGCTGA TTGTCGTGGC TGTCGTGCTG
GTTATGGCAC TGCTGCTGTG GGGGCTCGAC TCCCTGCTCG GCTGGGCGGT CTCCTTGATC
GTTGGCTAA
 
Protein sequence
MTPKTEAQES RFDLFKWLAV VALVVVGVVG NQYYSGSPIL YRVLVLLVLA AVAGFVALQT 
AKGKSFFALA KEARTEIRKV VWPTRQETTQ TTLIVVAVVL VMALLLWGLD SLLGWAVSLI
VG