Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PP_0440 |
Symbol | tuf |
ID | 1044182 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida KT2440 |
Kingdom | Bacteria |
Replicon accession | NC_002947 |
Strand | + |
Start bp | 532734 |
End bp | 533927 |
Gene Length | 1194 bp |
Protein Length | 397 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 637143825 |
Product | elongation factor Tu |
Protein accession | NP_742606 |
Protein GI | 26987181 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0050] GTPases - translation elongation factors |
TIGRFAM ID | [TIGR00231] small GTP-binding protein domain [TIGR00485] translation elongation factor TU |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.0580271 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 0 |
Fosmid unclonability p-value | 0.000000302311 |
Fosmid Hitchhiker | No |
Fosmid clonability | unclonable |
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Sequence |
Gene sequence | ATGGCTAAGG AAAAGTTTGA TCGTTCCCTT CCCCACGTTA ACGTCGGCAC TATCGGCCAC GTTGACCACG GTAAGACCAC TCTGACCGCA GCTCTGACTC GCGTTTGCTC CGAAGTTTTC GGTTCGGCAA TCGTTGAGTT CGACAAGATC GACTCGGCTC CGGAAGAAAA AGCGCGCGGT ATCACCATCA ACACCGCTCA CGTCGAGTAC AACTCGACCA TTCGTCACTA CGCTCACGTT GACTGCCCAG GTCACGCTGA CTACGTGAAG AACATGATCA CCGGTGCTGC CCAGATGGAC GGCGCGATCC TGGTTTGCTC GGCCGCCGAT GGTCCGATGC CACAAACCCG TGAGCACATC CTGTTGTCCC GTCAGGTAGG CGTTCCGTAC ATCGTGGTCT TCCTGAACAA GGCTGACCTG GTAGACGACG CTGAGCTGCT GGAGCTGGTC GAGATGGAAG TTCGCGACCT GCTGTCCACC TACGACTTCC CAGGCGACGA CACTCCGATC ATCATCGGTT CCGCTCGTAT GGCGCTGGAA GGCAAAGACG ACAACGAAAT GGGCACTACC GCTGTTAAGA AGCTGGTAGA AACTCTGGAC AGCTACATTC CTGAGCCAGT TCGTGCTATC GACCAGCCGT TCCTGATGCC GATCGAAGAC GTGTTCTCGA TCTCGGGTCG TGGTACCGTT GTTACCGGTC GTATCGAGCG TGGCATCGTC CGCGTTCAGG ATCCGCTGGA AATCGTTGGT CTGCGTGACA CCACCACCAC CACCTGCACC GGTGTTGAGA TGTTCCGCAA GCTGCTGGAC GAAGGTCGTG CTGGCGAGAA CTGCGGCGTT CTGCTGCGTG GTACCAAGCG TGACGACGTT GAGCGTGGCC AGGTTCTGGT CAAGCCAGGT TCGGTCAAGC CGCACACCAA GTTCACCGCA GAAGTCTACG TCCTGTCGAA GGAAGAAGGC GGCCGTCACA CTCCGTTCTT CAAAGGCTAC CGTCCACAGT TCTACTTCCG TACCACTGAC GTGACCGGTA ACTGCGAACT GCCGGAAGGC GTTGAAATGG TAATGCCAGG TGACAACATT CAGATGACTG TTACCCTGAT CAAGACCATC GCAATGGAAG ACGGTCTGCG CTTCGCTATC CGTGAAGGCG GTCGTACCGT CGGCGCCGGC GTCGTAGCAA AAATTATTGA ATAA
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Protein sequence | MAKEKFDRSL PHVNVGTIGH VDHGKTTLTA ALTRVCSEVF GSAIVEFDKI DSAPEEKARG ITINTAHVEY NSTIRHYAHV DCPGHADYVK NMITGAAQMD GAILVCSAAD GPMPQTREHI LLSRQVGVPY IVVFLNKADL VDDAELLELV EMEVRDLLST YDFPGDDTPI IIGSARMALE GKDDNEMGTT AVKKLVETLD SYIPEPVRAI DQPFLMPIED VFSISGRGTV VTGRIERGIV RVQDPLEIVG LRDTTTTTCT GVEMFRKLLD EGRAGENCGV LLRGTKRDDV ERGQVLVKPG SVKPHTKFTA EVYVLSKEEG GRHTPFFKGY RPQFYFRTTD VTGNCELPEG VEMVMPGDNI QMTVTLIKTI AMEDGLRFAI REGGRTVGAG VVAKIIE
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