Gene PP_0427 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPP_0427 
Symbol 
ID1044156 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida KT2440 
KingdomBacteria 
Replicon accessionNC_002947 
Strand
Start bp515092 
End bp515739 
Gene Length648 bp 
Protein Length215 aa 
Translation table11 
GC content63% 
IMG OID637143806 
Producthypothetical protein 
Protein accessionNP_742593 
Protein GI26987168 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG2941] Ubiquinone biosynthesis protein COQ7 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.861838 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTACCG AACGTCACTA CTCGCCGCTC GACCGCTTGT TGCTGCAGGC CGATACCGCC 
ATGCGCACCT TGCTGCCCTT CAGCGGCCAA CCCACCCGGC CATCGCCGGC CATCGTCCAG
CCAGACGCTG ACCTGGACGA GCAGCAGGCC CGTCATATTG CCGGGCTGAT GCGCATCAAC
CATACCGGTG AAGTCTGCGC CCAGGCGTTG TACCAAGGCC AGGCCCTGAC CGCCAAGCTG
CCCGAAGTGC GCAAGGCCAT GGAGCATGCC GCCGAGGAAG AAGTGGATCA CCTGGCCTGG
TGCGAACAGC GCATTCGCCA GCTGAACAGC CACCCGAGCG TGCTCAACCC TCTGTTCTAC
GGCATGTCGT TCGGCATTGG CGCACTGGCC GGGCTGGTCA GCGACAAGGT CAGCCTGGGC
TTCGTCGCCG CTACCGAACA TCAGGTGTGC AAGCACCTCG ACGAGCACCT GGAGCAGCTC
CCGCACGAAG ATGAAAAATC CCGGGCCATT CTCGAGCAGA TGCGCATCGA CGAAGAACAG
CACGCCGAGT CTGCACTGGA AGCCGGTGGT TATCGCTTCC CGGCCCCCGT CCGCTTTGGC
ATGAGCTTGC TGGCCAAGGT CATGACCAAG AGCACATACC GCATCTGA
 
Protein sequence
MATERHYSPL DRLLLQADTA MRTLLPFSGQ PTRPSPAIVQ PDADLDEQQA RHIAGLMRIN 
HTGEVCAQAL YQGQALTAKL PEVRKAMEHA AEEEVDHLAW CEQRIRQLNS HPSVLNPLFY
GMSFGIGALA GLVSDKVSLG FVAATEHQVC KHLDEHLEQL PHEDEKSRAI LEQMRIDEEQ
HAESALEAGG YRFPAPVRFG MSLLAKVMTK STYRI