Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PP_0427 |
Symbol | |
ID | 1044156 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida KT2440 |
Kingdom | Bacteria |
Replicon accession | NC_002947 |
Strand | - |
Start bp | 515092 |
End bp | 515739 |
Gene Length | 648 bp |
Protein Length | 215 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 637143806 |
Product | hypothetical protein |
Protein accession | NP_742593 |
Protein GI | 26987168 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG2941] Ubiquinone biosynthesis protein COQ7 |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.861838 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGCTACCG AACGTCACTA CTCGCCGCTC GACCGCTTGT TGCTGCAGGC CGATACCGCC ATGCGCACCT TGCTGCCCTT CAGCGGCCAA CCCACCCGGC CATCGCCGGC CATCGTCCAG CCAGACGCTG ACCTGGACGA GCAGCAGGCC CGTCATATTG CCGGGCTGAT GCGCATCAAC CATACCGGTG AAGTCTGCGC CCAGGCGTTG TACCAAGGCC AGGCCCTGAC CGCCAAGCTG CCCGAAGTGC GCAAGGCCAT GGAGCATGCC GCCGAGGAAG AAGTGGATCA CCTGGCCTGG TGCGAACAGC GCATTCGCCA GCTGAACAGC CACCCGAGCG TGCTCAACCC TCTGTTCTAC GGCATGTCGT TCGGCATTGG CGCACTGGCC GGGCTGGTCA GCGACAAGGT CAGCCTGGGC TTCGTCGCCG CTACCGAACA TCAGGTGTGC AAGCACCTCG ACGAGCACCT GGAGCAGCTC CCGCACGAAG ATGAAAAATC CCGGGCCATT CTCGAGCAGA TGCGCATCGA CGAAGAACAG CACGCCGAGT CTGCACTGGA AGCCGGTGGT TATCGCTTCC CGGCCCCCGT CCGCTTTGGC ATGAGCTTGC TGGCCAAGGT CATGACCAAG AGCACATACC GCATCTGA
|
Protein sequence | MATERHYSPL DRLLLQADTA MRTLLPFSGQ PTRPSPAIVQ PDADLDEQQA RHIAGLMRIN HTGEVCAQAL YQGQALTAKL PEVRKAMEHA AEEEVDHLAW CEQRIRQLNS HPSVLNPLFY GMSFGIGALA GLVSDKVSLG FVAATEHQVC KHLDEHLEQL PHEDEKSRAI LEQMRIDEEQ HAESALEAGG YRFPAPVRFG MSLLAKVMTK STYRI
|
| |