| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_0418 |
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| Symbol | |
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| ID | 1044141 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida KT2440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002947 |
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| Strand | - |
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| Start bp | 507119 |
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| End bp | 509008 |
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| Gene Length | 1890 bp |
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| Protein Length | 629 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637143797 |
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| Product | GDSL family lipase |
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| Protein accession | NP_742584 |
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| Protein GI | 26987159 |
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| COG category | [I] Lipid transport and metabolism
[R] General function prediction only |
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| COG ID | [COG3240] Phospholipase/lecithinase/hemolysin |
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| TIGRFAM ID | [TIGR01414] outer membrane autotransporter barrel domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.0624363 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGAAAAG CCCCGTTATT GCGCTTTACC CTCGCTTCAC TGGCCCTGGC CTGCAGCCAG
GCGTTGGCCG GCCCTTCGCC CTATTCAACC CTGATCGTGT TTGGCGACAG CCTCGCCGAT
GCCGGGCAGT TTCCCGATCT TGTTGGCGGT ACCCCAGGCG CGCGTTTCAC CAACCGTGAC
GCCGACGGCA ACTTCGCCCC GGTGTCGCCG ATGATCCTCG GTGGCCGCCT GGGCGTCGCG
CCAGGCGACC TTAACCCGTC GACATCCGTA GGTATCCAGC CCGATGGTAA TAACTGGGCA
GTCGGCGGGT ACACCACCCA GCAGATCCTG GACTCGATCA CGACAACGTC CGAGACCGTC
ATCCCCCCAG GAAACCCCAA TGCCGGGTTG GTGCTGCGCG AGCGCCCCGG CTACCTGGCC
AACGGCCTGC GCGCCGACCC CAATGCCTTG TACTACCTGA CAGGCGGCGG CAACGACTTC
CTTCAGGGCC TGGTGAATAG CCCGGCCGAC GCCGTAGCCG CCGGCGCCCG CCTGGCTGCC
AGCGCCCAAG CGCTTCAGCA AGGAGGCGCG CGCTACATCA TGGTCTGGCT GCTACCTGAC
CTCGGCCAAA CGCCCAATTT CAGTGGCACG CCACAGCAAA ACCCACTGTC ACTGCTCTCC
GCTGCGTTCA ACCAGTCACT GATCAGCCAG CTAGGGCAGA TCGATGCCCA GATCATTCCA
CTGAACATCC CTTTGCTGTT GAGCGAGGCG CTGGCCAGCC CCAGTCAGTT CGGCCTGGCC
AGCGACCAGA ACCTGGTCGG CACCTGCTAT AGCGGCGATA GCTGCGTGGA AAACCCGGTG
TACGGGATCA ACGGCACAAC GCCAGACCCG ACCAAACTGC TGTTCAACGA CTCGGTCCAC
CCGACCATCG CGGGTCAGCA GCTGATTGCC GATTACGCCT ACTCGATCCT CGCGGCCCCC
TGGGAACTGA CCCTGCTACC GGAAATGGCC CACGCCAGCC TGCGGGCTCA CCAGGATGAG
TTGCGTAATC AGTGGCAGAC GCCTTGGCAA GCAGTTGGCC AATGGCAAGC CTTTGTCGCC
AGCGGCGCTC AGGACCTGGA CTTCGACGGC CAGCACAGCG CGGCCAGCGG TGACGGCCGC
GGCTACAACC TGACCGTGGG CGGCAGCTAT CGCCTGAACG ACGCCTGGCG CCTGGGCCTG
GCCGGCGGTG CAAACCGGCA GAAGCTGGAA GCTGGTGAAC AGGACTCGGA CTACAAGCTG
AACAGTTATA TGGCCAGTGC CTTTGCCCAA TACCGCCAGG ACCGCTGGTG GGCCGACGCG
GCGCTGACCG CCGGGCACCT GGATTACAGC GACCTCAAGC GTACCTTCGC CCTGGGCGTG
AATGACCGCA GTGAGAAGGG CGACACCGAC GGCGAGGCCT GGGCAATGTC CGGGCGGCTG
GGCTACAACC TGGCGGCCGA CACCAGCAAC TGGCAGTTGG CACCTTTCAT CAGTGCCGAC
TATGCGCGGG TGAAGGTGGA TGGCTACGAC GAGAAGAGCG GACGTTCGAC GGCGCTTGGC
TTCGATGACC AGGAGCGCAC GTCACGCCGC CTGGGCGTGG GGCTGCTGGG CAGTGTGCAG
GTACTGCCAA GTACCCGGCT TTTCGCCGAG GTGGCGCAGG AGCATGAGTT CGAGGACGAC
GAGCAGGATG TGACGATGCA CCTGACCAGC TTGCCGGCGA ATGACTTCAC CCTGACCGGG
TATACGCCGC ACAGCGACCT GACCCGGGCG AGCCTGGGTG TGAGCCATGA ACTGGTGGCA
GGGGTGCATT TGCGCGGGAA CTACAACTGG CGCAAGAGTG ATGAGTTGAC GCAACAGGGT
ATTAGCGTGG GGGTTAGCGT GGACTTCTGA
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| Protein sequence | MRKAPLLRFT LASLALACSQ ALAGPSPYST LIVFGDSLAD AGQFPDLVGG TPGARFTNRD
ADGNFAPVSP MILGGRLGVA PGDLNPSTSV GIQPDGNNWA VGGYTTQQIL DSITTTSETV
IPPGNPNAGL VLRERPGYLA NGLRADPNAL YYLTGGGNDF LQGLVNSPAD AVAAGARLAA
SAQALQQGGA RYIMVWLLPD LGQTPNFSGT PQQNPLSLLS AAFNQSLISQ LGQIDAQIIP
LNIPLLLSEA LASPSQFGLA SDQNLVGTCY SGDSCVENPV YGINGTTPDP TKLLFNDSVH
PTIAGQQLIA DYAYSILAAP WELTLLPEMA HASLRAHQDE LRNQWQTPWQ AVGQWQAFVA
SGAQDLDFDG QHSAASGDGR GYNLTVGGSY RLNDAWRLGL AGGANRQKLE AGEQDSDYKL
NSYMASAFAQ YRQDRWWADA ALTAGHLDYS DLKRTFALGV NDRSEKGDTD GEAWAMSGRL
GYNLAADTSN WQLAPFISAD YARVKVDGYD EKSGRSTALG FDDQERTSRR LGVGLLGSVQ
VLPSTRLFAE VAQEHEFEDD EQDVTMHLTS LPANDFTLTG YTPHSDLTRA SLGVSHELVA
GVHLRGNYNW RKSDELTQQG ISVGVSVDF
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