Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PP_0401 |
Symbol | ksgA |
ID | 1044115 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida KT2440 |
Kingdom | Bacteria |
Replicon accession | NC_002947 |
Strand | - |
Start bp | 486511 |
End bp | 487314 |
Gene Length | 804 bp |
Protein Length | 267 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637143781 |
Product | dimethyladenosine transferase |
Protein accession | NP_742568 |
Protein GI | 26987143 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0030] Dimethyladenosine transferase (rRNA methylation) |
TIGRFAM ID | [TIGR00755] dimethyladenosine transferase |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACGAGC AATACCAACA CCGGGCGCGC AAGCGCTTCG GCCAGAACTT CCTGCACGAC GCCGGTATCA TCGACCGCAT CCTGCGTGCC ATCAACGCCA AGGCCGGCGA ACACCTGCTG GAAATCGGCC CGGGCCAGGG CGCCCTGACC GAAGGCCTGC TGGGCAGTGG CGCACAGCTG GACGTGGTGG AGCTGGACAA AGACCTGGTG CCGATCCTGC AGCACAAGTT CGCCGATCGC AGCAACTTCC GCCTGCACCA GGGTGACGCC CTGAAGTTCG ACTTCAACCA GTTGGGTGTG CCGCCACGCA GCCTCAAGGT GGTTGGCAAC CTGCCCTACA ACATCTCCAC CCCGCTGATC TTCCACCTGC TCAGCCACGC CGGGCTGATC CGCGACATGC ATTTCATGCT GCAGAAGGAA GTGGTCGAGC GCATGGCCGC CGGCCCTGGC GGCGGTGACT GGGGGCGCTT GTCAATCATG GTGCAGTACC ACTGCCGCGT GGAGCACCTG TTCAATGTCG GCCCTGGTGC CTTCAACCCA CCTCCGAAAG TGGATTCGGC AATCGTCCGC CTGGTGCCGC ACGAAGTGCT GCCGTTCCCG GCCAAGGACC ACCTGCTGCT GGAGCGTGTC GTTCGCGAAG CGTTCAACCA GCGCCGCAAG ACCCTGCGCA ACACCATGAA AGGCCTGCTG GACAGCGCCG CCATCGAGGC TGCTGGCGTT GATGGCAGCC TGCGCCCTGA ACAGCTCGAC CTGGCAGCCT TCGTGCGCCT GGCTGACCAA CTGGCGGATC AGCAACAAGC CTGA
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Protein sequence | MNEQYQHRAR KRFGQNFLHD AGIIDRILRA INAKAGEHLL EIGPGQGALT EGLLGSGAQL DVVELDKDLV PILQHKFADR SNFRLHQGDA LKFDFNQLGV PPRSLKVVGN LPYNISTPLI FHLLSHAGLI RDMHFMLQKE VVERMAAGPG GGDWGRLSIM VQYHCRVEHL FNVGPGAFNP PPKVDSAIVR LVPHEVLPFP AKDHLLLERV VREAFNQRRK TLRNTMKGLL DSAAIEAAGV DGSLRPEQLD LAAFVRLADQ LADQQQA
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