Gene PP_0397 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPP_0397 
Symbol 
ID1044111 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida KT2440 
KingdomBacteria 
Replicon accessionNC_002947 
Strand
Start bp482515 
End bp484437 
Gene Length1923 bp 
Protein Length640 aa 
Translation table11 
GC content56% 
IMG OID637143777 
Productputative serine protein kinase, PrkA 
Protein accessionNP_742564 
Protein GI26987139 
COG category[T] Signal transduction mechanisms 
COG ID[COG2766] Putative Ser protein kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTATTT TTAGCCACTT CCAACAACGT TTCGAGTCTA CGCGCCAGGA AGAACTCTCG 
CTGCAGGAGT ACCTCGAGCT GTGCAAAGAG GATCGCAGTG CCTACGCATC GGCGGCCGAA
CGGCTGTTGC TGGCCATCGG TGAGCCAGAG CTGATCGACA CCTCTACCAA CTCCAGGCTG
TCGCGCATCT TCTCCAACAA GGTTATCCGC CGCTATCCGG CCTTTGCCGA CTTCCATGGC
ATGGAAGAGT GCATCGACCA GATCGTGTCG TACTTCCGCC ACGCCGCCCA AGGCCTGGAA
GAGAAGAAAC AGATCCTCTA TCTGCTGGGC CCGGTAGGCG GCGGCAAGTC CTCGCTTGCG
GAAAAACTCA AGCAGCTGAT GGAAAAGGTG CCCTTCTACG CGATCAAGGG CTCGCCGGTA
TTCGAGTCAC CTCTGGGCTT GTTCAATGCC ACCGAAGATG GGGCCATTCT CGAGGAAGAG
TTCGGCATCC CACGGCGCTA CCTCAACACC ATCATGTCGC CTTGGGCCAC CAAGCGCCTG
CAGGAGTTTG GCGGTGACAT CTCCAAGTTC AAGGTGGTGA AGCTGTACCC GTCGATTCTT
AACCAGATCG CCATTGCCAA GACCGAACCC GGCGATGAAA ACAACCAGGA CATCTCGGCC
CTGGTCGGCA AGGTCGATAT CCGCAAACTT GAGGAATACC CACAGAACGA CGCCGACGCC
TATAGCTACT CGGGCGCGCT TTGCCGGGCC AACCAGGGCC TGATGGAATT CGTCGAAATG
TTCAAGGCGC CGATCAAGGT CCTGCACCCC TTGCTCACCG CCACCCAGGA AGGCAACTAC
AACAGTACCG AAGGCCTTGG GGCGATCCCC TATACCGGCA TTCTGCTGGC GCACTCCAAC
GAATCGGAGT GGCACACCTT CCGTAACAAC AAGAACAACG AAGCGTTCAT CGACAGGATC
TATATCGTCA AGGTGCCGTA CTGCCTGCGG GTCAGCGATG AAATCAAGAT CTACGACAAA
CTGCTGGTCA ACAGCTCGCT GTCCAAGGCC CACTGTGCGC CAGATACGCT CAAGATGCTG
GCTCAGTTCA CAGTGCTTTC GCGCCTGAAA GAGCCCGAGA ACTCCAATAT CTATTCCAAG
ATGCGCGTTT ACGACGGGGA AAACCTCAAG GACACCGATC CAAAGGCCAA GTCGATCCAG
GAATACCGGG ACTCTGCGGG TGTCGACGAA GGCATGAACG GCCTGTCGAC TCGCTTCGCC
TTCAAGATCC TGTCCAAGGT GTTCAACTTC GACCCACACG AAATTGCCGC CAACCCGGTG
CACCTGCTGT ATGTCCTCGA ACAGCAGATC GAACAGGAGC AATTCCCGGC TGAAGTGCGC
GAACGCTATC TGCGCTACCT GAAGGAATAC CTGGCACCTC GCTACATCGA GTTTATCGGC
AAGGAAATCC AGACTGCCTA CCTGGAGTCC TACAGCGAAT ACGGCCAGAA CATCTTCGAC
CGCTACGTGC TGTATGCAGA TTTCTGGATC CAGGATCAGG AATACCGCGA CCCGGAAACC
GGCGAAATTC TCAACCGCAT TGCGCTCAAC GAGGAACTGG AGAAGATCGA GAAACCGGCT
GGCATCAGCA ACCCGAAAGA CTTCCGCAAC GAGATCGTCA ACTTCGTACT GCGCGCACGC
GCCAACAACA ATGGCAAGAA TCCAAGCTGG CTGAGCTATG AAAAGCTGCG GGTCGTGATC
GAGAAGAAAA TGTTCTCCAA CACCGAAGAC CTGCTGCCGG TCATCAGCTT CAACGCCAAG
GCCAGCAAAG AGGACCAGAA GAAACACAAC GACTTCGTCA CCCGGATGGT GGAGCGTGGC
TATACCGACA AACAGGTGCG CCTGCTGTCG GAATGGTACC TGCGGGTCAG GAAATCGCAA
TAA
 
Protein sequence
MSIFSHFQQR FESTRQEELS LQEYLELCKE DRSAYASAAE RLLLAIGEPE LIDTSTNSRL 
SRIFSNKVIR RYPAFADFHG MEECIDQIVS YFRHAAQGLE EKKQILYLLG PVGGGKSSLA
EKLKQLMEKV PFYAIKGSPV FESPLGLFNA TEDGAILEEE FGIPRRYLNT IMSPWATKRL
QEFGGDISKF KVVKLYPSIL NQIAIAKTEP GDENNQDISA LVGKVDIRKL EEYPQNDADA
YSYSGALCRA NQGLMEFVEM FKAPIKVLHP LLTATQEGNY NSTEGLGAIP YTGILLAHSN
ESEWHTFRNN KNNEAFIDRI YIVKVPYCLR VSDEIKIYDK LLVNSSLSKA HCAPDTLKML
AQFTVLSRLK EPENSNIYSK MRVYDGENLK DTDPKAKSIQ EYRDSAGVDE GMNGLSTRFA
FKILSKVFNF DPHEIAANPV HLLYVLEQQI EQEQFPAEVR ERYLRYLKEY LAPRYIEFIG
KEIQTAYLES YSEYGQNIFD RYVLYADFWI QDQEYRDPET GEILNRIALN EELEKIEKPA
GISNPKDFRN EIVNFVLRAR ANNNGKNPSW LSYEKLRVVI EKKMFSNTED LLPVISFNAK
ASKEDQKKHN DFVTRMVERG YTDKQVRLLS EWYLRVRKSQ