Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PP_0397 |
Symbol | |
ID | 1044111 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida KT2440 |
Kingdom | Bacteria |
Replicon accession | NC_002947 |
Strand | - |
Start bp | 482515 |
End bp | 484437 |
Gene Length | 1923 bp |
Protein Length | 640 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 637143777 |
Product | putative serine protein kinase, PrkA |
Protein accession | NP_742564 |
Protein GI | 26987139 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG2766] Putative Ser protein kinase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTATTT TTAGCCACTT CCAACAACGT TTCGAGTCTA CGCGCCAGGA AGAACTCTCG CTGCAGGAGT ACCTCGAGCT GTGCAAAGAG GATCGCAGTG CCTACGCATC GGCGGCCGAA CGGCTGTTGC TGGCCATCGG TGAGCCAGAG CTGATCGACA CCTCTACCAA CTCCAGGCTG TCGCGCATCT TCTCCAACAA GGTTATCCGC CGCTATCCGG CCTTTGCCGA CTTCCATGGC ATGGAAGAGT GCATCGACCA GATCGTGTCG TACTTCCGCC ACGCCGCCCA AGGCCTGGAA GAGAAGAAAC AGATCCTCTA TCTGCTGGGC CCGGTAGGCG GCGGCAAGTC CTCGCTTGCG GAAAAACTCA AGCAGCTGAT GGAAAAGGTG CCCTTCTACG CGATCAAGGG CTCGCCGGTA TTCGAGTCAC CTCTGGGCTT GTTCAATGCC ACCGAAGATG GGGCCATTCT CGAGGAAGAG TTCGGCATCC CACGGCGCTA CCTCAACACC ATCATGTCGC CTTGGGCCAC CAAGCGCCTG CAGGAGTTTG GCGGTGACAT CTCCAAGTTC AAGGTGGTGA AGCTGTACCC GTCGATTCTT AACCAGATCG CCATTGCCAA GACCGAACCC GGCGATGAAA ACAACCAGGA CATCTCGGCC CTGGTCGGCA AGGTCGATAT CCGCAAACTT GAGGAATACC CACAGAACGA CGCCGACGCC TATAGCTACT CGGGCGCGCT TTGCCGGGCC AACCAGGGCC TGATGGAATT CGTCGAAATG TTCAAGGCGC CGATCAAGGT CCTGCACCCC TTGCTCACCG CCACCCAGGA AGGCAACTAC AACAGTACCG AAGGCCTTGG GGCGATCCCC TATACCGGCA TTCTGCTGGC GCACTCCAAC GAATCGGAGT GGCACACCTT CCGTAACAAC AAGAACAACG AAGCGTTCAT CGACAGGATC TATATCGTCA AGGTGCCGTA CTGCCTGCGG GTCAGCGATG AAATCAAGAT CTACGACAAA CTGCTGGTCA ACAGCTCGCT GTCCAAGGCC CACTGTGCGC CAGATACGCT CAAGATGCTG GCTCAGTTCA CAGTGCTTTC GCGCCTGAAA GAGCCCGAGA ACTCCAATAT CTATTCCAAG ATGCGCGTTT ACGACGGGGA AAACCTCAAG GACACCGATC CAAAGGCCAA GTCGATCCAG GAATACCGGG ACTCTGCGGG TGTCGACGAA GGCATGAACG GCCTGTCGAC TCGCTTCGCC TTCAAGATCC TGTCCAAGGT GTTCAACTTC GACCCACACG AAATTGCCGC CAACCCGGTG CACCTGCTGT ATGTCCTCGA ACAGCAGATC GAACAGGAGC AATTCCCGGC TGAAGTGCGC GAACGCTATC TGCGCTACCT GAAGGAATAC CTGGCACCTC GCTACATCGA GTTTATCGGC AAGGAAATCC AGACTGCCTA CCTGGAGTCC TACAGCGAAT ACGGCCAGAA CATCTTCGAC CGCTACGTGC TGTATGCAGA TTTCTGGATC CAGGATCAGG AATACCGCGA CCCGGAAACC GGCGAAATTC TCAACCGCAT TGCGCTCAAC GAGGAACTGG AGAAGATCGA GAAACCGGCT GGCATCAGCA ACCCGAAAGA CTTCCGCAAC GAGATCGTCA ACTTCGTACT GCGCGCACGC GCCAACAACA ATGGCAAGAA TCCAAGCTGG CTGAGCTATG AAAAGCTGCG GGTCGTGATC GAGAAGAAAA TGTTCTCCAA CACCGAAGAC CTGCTGCCGG TCATCAGCTT CAACGCCAAG GCCAGCAAAG AGGACCAGAA GAAACACAAC GACTTCGTCA CCCGGATGGT GGAGCGTGGC TATACCGACA AACAGGTGCG CCTGCTGTCG GAATGGTACC TGCGGGTCAG GAAATCGCAA TAA
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Protein sequence | MSIFSHFQQR FESTRQEELS LQEYLELCKE DRSAYASAAE RLLLAIGEPE LIDTSTNSRL SRIFSNKVIR RYPAFADFHG MEECIDQIVS YFRHAAQGLE EKKQILYLLG PVGGGKSSLA EKLKQLMEKV PFYAIKGSPV FESPLGLFNA TEDGAILEEE FGIPRRYLNT IMSPWATKRL QEFGGDISKF KVVKLYPSIL NQIAIAKTEP GDENNQDISA LVGKVDIRKL EEYPQNDADA YSYSGALCRA NQGLMEFVEM FKAPIKVLHP LLTATQEGNY NSTEGLGAIP YTGILLAHSN ESEWHTFRNN KNNEAFIDRI YIVKVPYCLR VSDEIKIYDK LLVNSSLSKA HCAPDTLKML AQFTVLSRLK EPENSNIYSK MRVYDGENLK DTDPKAKSIQ EYRDSAGVDE GMNGLSTRFA FKILSKVFNF DPHEIAANPV HLLYVLEQQI EQEQFPAEVR ERYLRYLKEY LAPRYIEFIG KEIQTAYLES YSEYGQNIFD RYVLYADFWI QDQEYRDPET GEILNRIALN EELEKIEKPA GISNPKDFRN EIVNFVLRAR ANNNGKNPSW LSYEKLRVVI EKKMFSNTED LLPVISFNAK ASKEDQKKHN DFVTRMVERG YTDKQVRLLS EWYLRVRKSQ
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