Gene PP_0396 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPP_0396 
Symbol 
ID1044110 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida KT2440 
KingdomBacteria 
Replicon accessionNC_002947 
Strand
Start bp481088 
End bp482410 
Gene Length1323 bp 
Protein Length440 aa 
Translation table11 
GC content58% 
IMG OID637143776 
Producthypothetical protein 
Protein accessionNP_742563 
Protein GI26987138 
COG category[S] Function unknown 
COG ID[COG2718] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGTGGCTTG CAGCTTGTGG GTTGCAGCTG CATCCAGTCA CCGGAGGGAC CATGAGCTAC 
GTTATAGACC GACGCCTGAA CGGCAAGAAC AAGAGCACGG TCAACCGCCA GCGCTTCCTG
CGGCGGTACC GCGAACATAT CAAGAAGGCC GTCGAAGAGG CGGTGAGCCG CCGTTCCATC
ATGGATATGG AACATGGCGA GCAGATCAGT ATTCCCGGGC GCGACATCGA CGAACCGGTC
TTGCATCATG GTCGTGGGGG CAAACAGACC ATCGTGCATC CTGGCAACAA AGAATTCACT
GCCGGTGAAC ACATCCCACG GCCGCAAGGC GGTGGAGGCG GTGGCGGTCG CGGCAAGGCC
GGCAATTCCG GCGAGGGCAT GGACGAGTTC GTCTTCCAGA TCACCCAGGA AGAATTTCTC
GAATTCATGT TCGAAGACCT TGAGCTACCC AACCTGGTCA AACGTCACCT GACTGGCGCC
GACACCTTCA AGACTGTTCG CGCCGGCATC GCCAACGAAG GCAACCCGTC ACGCATCAAT
ATCGTGCGCA CCCTGCGCTC GGCCCATGCC CGGCGTATCG CCCTGACCGG CAGCAGCCGC
GCCCTGCTGC GCGAAGCACA AAAGGAACTC GATCGCCTGC GGGTCGAAGA GCCGGACAAT
TTCACCGATA TCCAGGAAGT CGAACAGGAA ATCGAGCGCC TGAAGGCACG TATCAACCGC
CTGCCCTTCC TCGACACCTT CGACCTCAAG TACAACCTGC TGGTCAAGCA ACCCAACCCC
AGCTCGAAGG CAGTGATGTT CTGCCTGATG GACGTATCCG GTTCGATGAC CCAAGCCACC
AAGGACATCG CAAAGCGCTT CTTCATCCTG CTGTACCTGT TCCTCAAGCG TAACTACGAG
CGCATCGAAG TCGTGTTCAT TCGCCACCAC ACCAGTGCCC GGGAAGTCGA TGAAGAAGAG
TTCTTCTACT CGCGGGAAAC CGGCGGCACC ATCGTCTCCA GTGCCCTAAA GCTGATGCAG
GAGATCATGG CCGAGCGTTA CCCGGCCAGC GACTGGAACA TCTATGCCGC GCAGGCTTCT
GATGGCGACA ACTGGAACGA CGACTCACCC ATCTGCCGCG ACATCCTCTC CAAACAGATC
ATGCCGCATG TGCAGTACTA CACTTACGTT GAGATCACCC CCCGTGAACA CCAGGCGCTG
TGGTATGAAT ACGAGCGTAT CGGAGATGCT TTCCCCGACA CGTTCGCCCA GCAGCAGTTG
GTATCGGCCG GCGATATCTA CCCGGTCTTC CGTGAACTCT TCCAGCGCAG GTTAGCCACA
TGA
 
Protein sequence
MWLAACGLQL HPVTGGTMSY VIDRRLNGKN KSTVNRQRFL RRYREHIKKA VEEAVSRRSI 
MDMEHGEQIS IPGRDIDEPV LHHGRGGKQT IVHPGNKEFT AGEHIPRPQG GGGGGGRGKA
GNSGEGMDEF VFQITQEEFL EFMFEDLELP NLVKRHLTGA DTFKTVRAGI ANEGNPSRIN
IVRTLRSAHA RRIALTGSSR ALLREAQKEL DRLRVEEPDN FTDIQEVEQE IERLKARINR
LPFLDTFDLK YNLLVKQPNP SSKAVMFCLM DVSGSMTQAT KDIAKRFFIL LYLFLKRNYE
RIEVVFIRHH TSAREVDEEE FFYSRETGGT IVSSALKLMQ EIMAERYPAS DWNIYAAQAS
DGDNWNDDSP ICRDILSKQI MPHVQYYTYV EITPREHQAL WYEYERIGDA FPDTFAQQQL
VSAGDIYPVF RELFQRRLAT