Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PP_0390 |
Symbol | gcp |
ID | 1044102 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida KT2440 |
Kingdom | Bacteria |
Replicon accession | NC_002947 |
Strand | + |
Start bp | 475708 |
End bp | 476733 |
Gene Length | 1026 bp |
Protein Length | 341 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 637143770 |
Product | putative DNA-binding/iron metalloprotein/AP endonuclease |
Protein accession | NP_742557 |
Protein GI | 26987132 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0533] Metal-dependent proteases with possible chaperone activity |
TIGRFAM ID | [TIGR00329] metallohydrolase, glycoprotease/Kae1 family |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.636625 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTAGTAC TGGGATTGGA AACATCCTGC GACGAAACCG GCGTCGCATT ATACGACAGT GAACGCGGTT TGTTGGCCGA CGCACTGTTC AGCCAGATCG ACCTGCACCG CGTCTTCGGC GGCGTGGTGC CCGAGCTTGC CTCGCGTGAT CACGTCAAGC GCATGCTGCC GCTCATCCGC CAGGTGCTGG ACGAGGCAGG TTGCGTTGCC ACCGAAATCG ACGCCATCGC CTACACCGCA GGCCCCGGCC TGGTCGGCGC CTTGCTGGTG GGCGCTTCCT GCGCCCAGGC GCTGGCCTTT GCCTGGGACA TCCCGGCGAT CGGTGTGCAC CACATGGAGG GTCACCTGCT GGCACCCATG CTGGAAGAAA ACCCGCCAGA GTTTCCGTTC GTCGCTTTGT TGGTTTCCGG TGGACATACC CAGCTGGTTC GGGTCGATGG CATCGGTCAG TACGAACTGT TGGGCGAAAG CCTGGACGAT GCTGCCGGTG AAGCGTTCGA CAAGACCGCC AAGCTGATCG GCCTCAATTA TCCTGGTGGT CCGGAAATCG CGCGTCTGGC CGAGCAAGGT GTGCCTGGGC GCTTCGTGTT CCCGCGGCCA ATGACCGATC GGCCAGGCCT GGAATTCAGC TTCAGTGGCC TCAAGACCTT CGCCCTGAAC ACCTGGCAGC AATGCAAGAA TGCTGGCGAC GACAGTGAGC AAACCCGTTG CGACCTGTCC CTGGCATTCC AGCAGGCGGT GGTGGAGACT TTGACCATCA AGTGCAAGCG GGCGCTCAAG CAGACCGGCC TCAAGCGGCT GGTCATCGCG GGTGGCGTGA GTGCCAACAA GGCCCTGCGC GCGTCCCTGG AGGACATGCT CGGTAGCATC AAGGGCAACG TGTACTACGC GCGTCCGCAA TTCTGTACCG ACAATGGTGC GATGATCGCC TACGCCGGTT GCCAGCGCCT GCTGGCCGGG CAGCAGCAAG ACCTGGCGAT CAGCGTGCAG GCACGCTGGC CGATGGAACA GTTGCCGCCG CTGTAA
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Protein sequence | MLVLGLETSC DETGVALYDS ERGLLADALF SQIDLHRVFG GVVPELASRD HVKRMLPLIR QVLDEAGCVA TEIDAIAYTA GPGLVGALLV GASCAQALAF AWDIPAIGVH HMEGHLLAPM LEENPPEFPF VALLVSGGHT QLVRVDGIGQ YELLGESLDD AAGEAFDKTA KLIGLNYPGG PEIARLAEQG VPGRFVFPRP MTDRPGLEFS FSGLKTFALN TWQQCKNAGD DSEQTRCDLS LAFQQAVVET LTIKCKRALK QTGLKRLVIA GGVSANKALR ASLEDMLGSI KGNVYYARPQ FCTDNGAMIA YAGCQRLLAG QQQDLAISVQ ARWPMEQLPP L
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