| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_0381 |
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| Symbol | pqqF |
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| ID | 1044091 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida KT2440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002947 |
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| Strand | - |
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| Start bp | 460163 |
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| End bp | 462463 |
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| Gene Length | 2301 bp |
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| Protein Length | 766 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637143760 |
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| Product | coenzyme PQQ biosynthesis protein PqqF |
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| Protein accession | NP_742548 |
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| Protein GI | 26987123 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG1025] Secreted/periplasmic Zn-dependent peptidases, insulinase-like |
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| TIGRFAM ID | [TIGR02110] coenzyme PQQ biosynthesis probable peptidase PqqF |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCTGACG CCATCCGCCA ACTCACCCTC GCCAACGGCT TGCAACTGAC CCTGCGCCAC
GCCCCGCGCC TCAAGCGCTC GGCCGCCGCA CTGCGGGTGC ACGCGGGCAG CCACGACGCA
CCTGCCAAAT GGCCCGGTCT GGCGCACTTC CTCGAACACC TGTTCTTCCT CGGTACCCCG
CGCTTCCCGC TGGAAGACGG CCTGATGCGC TACGTGCAAG CCCTGGGCGG CCAGGTCAAC
GCCAGCACCC GCGAACGCGC CACCGACTTT TTCTTCGAGG TGCCACCCAA CGCGCTCGGT
GGCGGTCTCG AGCGCCTGTG CCAAATGCTG GCAGAACCGG ATCTGGGCAT CGAACGCCAA
CGCCGTGAAC GCGAAGTGAT CCATGCCGAA TTCATCGCCT GGTCGCGCAA TCCAACGGCC
CAACAGCAGT TCGCCTTGCT GCAGTCAGTG TCAGCCAGGC ATCCACTGGG CGCTTTTCAT
GCTGGCAATC GATACACCCT GGCCTTGCAC GATGCGGCCT TCCAGCAAGC GCTTGCGGGC
TTTCATCAAC GCTTCTACCA AGGCGGCCAG ATCTGCCTGA GCCTTTGCGG TCCGCAGCCG
CTGGATGAAC TTGAACGCCT TGCCCGGCAG CAGGCCGAAC TGTTCGCTGC AGGTGAGCGC
GTGCCGCAAA TACTGCCGCC GCCACTGCCA GCAATGGCTA GCGCTTTGAC CTTCACGCAC
CAAAGCCTCC CCAGCGGTGC CGAGCACGCC CTGGAACTGC TGATCGCTTA CCTGGAGGAC
AGCCGCCCAG GTACCTGGCT GGGCGCGCTT CGCGAGCGTG GCTGGCTACG ACGTTTCACA
GCCGAAAGGC TGTATGCGTT CGCCGGTCAG CTGCTGTGGC ACCTTGACCT GAAGCTCAGT
GCCGACGCTT GCCCGGACGA AGCCAGCGCC CTGCTGCAAG GTTGGTTCAG GTTCATCCGT
CAGGCCGACC GCGAACAGTT GAACCATCAA TTCGGCTTAC TGCAGCACAG CCGAGCGCAC
AGTGCCAGCG CGCTCGAGTT GGCCCGCCGG GACAGCACTG GCCAGCCGTT CGCCAAGCTG
GATACCCAAG GGTTGCAGGC GCTTGGCGCC CTGCTGGAAA GCCTGCCAGG TGCCGACCAT
GGCGATTGGC AGCTGCTGCC AGTCGACCCA TTGCTGAAGG CTGACCTGCC CCATGCCAAG
GCGCAACCGC TGCCGGCAGC GCTGAAGATC AGTGACCAGC TTCCGCCCGC GCGCCAATTC
GCAGCGCTGT ACCTGCGCTG GCATGTACCT TCACCTATGC GCCAGCCGTT ACAGCGTGTG
CTGGAACAGG CCCTGGCGCC ACTGCAGGAA CGTTGTGACC GCGCCTCCGT GCAACTGCAG
TACAGCAGTG CCGGGGAATA CTGGCAGTTG CACTGCGCCG GCCTGCCAGC AGCAGTGCTG
CGGGCAGTGG AACAAGCCTT GGCCTTGATG CTCAAGCCAC CTGCCAGTTG CTGGCTGCCC
TGCACGGCGC TGCCCCCGGC CCTGATCCCC ATCAGGGCCC TGCTCAAGCA ACTGCCAGAC
GCGGTACGGG GTAGCCTGCC CCCAGCGGTG CCTGCCTGCA CGCTGACCCA GCAGCAACTC
GACAGCCTGT GGCTGCACAC CGAGTGGCAT GGCATGGCCG CAGGCTTCGA GGATACCGCG
CTAAAGGCCT TGGGCGCTGC GCTGGAACAG TGCCCTGGGC AAGGCTCGCG ACCTAGCCCC
CTGCCAACCT GGGCAAACCA CCGCTGGCAG CATGCCCAAG TGCCAGGCAG CGAACATGCC
CTGCTGCTGT TCTGCCCGTT GCCGGCGGCA AAAGAGGCCG CGGGCCGCCT GTTAGCCCAA
TTGCTGCAAG GGCCGGTTTA CCAGCGCCTG CGGGTAGACT TGCAACTCGG CTACGCGGTG
TTCAGCGCCT TTCGTCAGGT CGAGGGGGTC GGTGGGCTGC TGTTCGGCGT GCAATCCCCC
CACACCGATC AGGCACAGGT GCTCGACCAC CTGCTCAACC TGCTGCGCCA TGGCGTCACC
CTTGACCCGG CCGCTCGCCA GGCATTGGCT GGGCAATTCG ACGAGCCCGC CATGGCCAAT
GCCGATGTCG CCGAATGGGC GTGGCAGACA CACTTGGCCA CACAAGCCGA TCGGCTGGAT
GTGCTGCGCA GGTCTATCCT GACTACGCGG CAGACGGATC TGGACCACCT GCTGAGCGCC
CTGCTCGACC CAGGTTCCGC TTGGCTATGT TTGGCCAACG CTGCCGCGCC AGACACTTCC
TGGCAGGGCG AAAATCGATG A
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| Protein sequence | MPDAIRQLTL ANGLQLTLRH APRLKRSAAA LRVHAGSHDA PAKWPGLAHF LEHLFFLGTP
RFPLEDGLMR YVQALGGQVN ASTRERATDF FFEVPPNALG GGLERLCQML AEPDLGIERQ
RREREVIHAE FIAWSRNPTA QQQFALLQSV SARHPLGAFH AGNRYTLALH DAAFQQALAG
FHQRFYQGGQ ICLSLCGPQP LDELERLARQ QAELFAAGER VPQILPPPLP AMASALTFTH
QSLPSGAEHA LELLIAYLED SRPGTWLGAL RERGWLRRFT AERLYAFAGQ LLWHLDLKLS
ADACPDEASA LLQGWFRFIR QADREQLNHQ FGLLQHSRAH SASALELARR DSTGQPFAKL
DTQGLQALGA LLESLPGADH GDWQLLPVDP LLKADLPHAK AQPLPAALKI SDQLPPARQF
AALYLRWHVP SPMRQPLQRV LEQALAPLQE RCDRASVQLQ YSSAGEYWQL HCAGLPAAVL
RAVEQALALM LKPPASCWLP CTALPPALIP IRALLKQLPD AVRGSLPPAV PACTLTQQQL
DSLWLHTEWH GMAAGFEDTA LKALGAALEQ CPGQGSRPSP LPTWANHRWQ HAQVPGSEHA
LLLFCPLPAA KEAAGRLLAQ LLQGPVYQRL RVDLQLGYAV FSAFRQVEGV GGLLFGVQSP
HTDQAQVLDH LLNLLRHGVT LDPAARQALA GQFDEPAMAN ADVAEWAWQT HLATQADRLD
VLRRSILTTR QTDLDHLLSA LLDPGSAWLC LANAAAPDTS WQGENR
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