| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_0369 |
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| Symbol | |
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| ID | 1044078 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida KT2440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002947 |
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| Strand | + |
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| Start bp | 447502 |
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| End bp | 448704 |
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| Gene Length | 1203 bp |
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| Protein Length | 400 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637143748 |
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| Product | GGDEF domain-containing protein |
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| Protein accession | NP_742536 |
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| Protein GI | 26987111 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.0652441 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAGAGACC TCAGCGTCTT TTTCACATCG CTGTTCAATG TCCTGCCTAC CTTGGTTCTG
CTGCTGGGTG GCGCCTACTG CGCGGTATAC CGCCGTCAGC GTGAGCTGTT CCTGATGCTG
ACGGTGTACA TCGCCTACTT TCTGCTCGAT ACCCAGACCG ACTTCTACCG TGACCATGGC
CGCGTGCGTG AGGACGCCGC GGTGATCTTC CACCTTGTCT GCCTGTTGCT GCCGGCGCTG
TTCGGGCTGT ATGGCGCCTG GCAGGAGCGT ACGCACCTGC TGCAGGACCT GGTCGCCCGC
GGTGCGGTGC TGTTTGCCGT GGGCAGTGTG GCGGTGGCCC TCCAGCAAAG CTACCCCGAG
GCGTTGCTGA CCTGGTTGGC GGAGATCCGC TGGCCGGCTT TGCATGGCCA CTGGATGAGC
CTGATCCAGA TGGTCTACCC GCTGTTCCTG GGTGTGTTCA TTCTGCTGGT GGTGCAGTAC
CTGCGTGCAC CCCGGCCGCT GCACGCCGCG CAGTTGATCG GCCTGCTGGG CATTTTCTGG
ATGCTGCCGC AGACCTTCAT CCTGCCGTTT ACCTTGAACA TCATGTGCAG CCAGGTGATG
TTGATGATCG CCGCAGCAGT GGCGCACGAG GCTTATCAGA TGGCCTTCCG TGACGAGCTG
ACTGGCCTGC CGGGGCGCCG TGCGCTGAAC GAGCGCATGC AGCGCCTGGG GCGTAACTAT
GTGATCGCCA TGACCGATGT CGACCACTTC AAGAAATTCA ATGACACCCA CGGCCACGAT
GTCGGTGACC AGGTGCTGCG GTTGGTCGCC AGCCGCTTGT CCAAGGTCAC CGGCGGTGGC
CGTGCCTACC GTTATGGCGG GGAGGAGTTC GCCCTGGTGT TCGCCGGCAA GACCGCCGCG
GAATGCGTGC CGCATGTGGA AGCCGTGCGT GAAGTGATCG CCAATTACGT GATGCACCTG
CGCGATCAGC ACAACCGCCC GCAGGACGAT ACCGCCGGGC GCCAGCGCCG GGCTGGCAGC
GCCGGCGGCA CGGTCTCGGT CACCATCAGT ATCGGCGTGG CCGAGCGCCA GGCCGATCAT
CGCAACCCCG AGGCGGTGCT GAAATCCGCC GACCAGGCGC TTTACAGTGC CAAAGGCGCG
GGGCGCAATT GTGTCATGGT GCATGGGCGA CAATCACCGC GTGGGGCAGT GCGTACGGCG
TGA
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| Protein sequence | MRDLSVFFTS LFNVLPTLVL LLGGAYCAVY RRQRELFLML TVYIAYFLLD TQTDFYRDHG
RVREDAAVIF HLVCLLLPAL FGLYGAWQER THLLQDLVAR GAVLFAVGSV AVALQQSYPE
ALLTWLAEIR WPALHGHWMS LIQMVYPLFL GVFILLVVQY LRAPRPLHAA QLIGLLGIFW
MLPQTFILPF TLNIMCSQVM LMIAAAVAHE AYQMAFRDEL TGLPGRRALN ERMQRLGRNY
VIAMTDVDHF KKFNDTHGHD VGDQVLRLVA SRLSKVTGGG RAYRYGGEEF ALVFAGKTAA
ECVPHVEAVR EVIANYVMHL RDQHNRPQDD TAGRQRRAGS AGGTVSVTIS IGVAERQADH
RNPEAVLKSA DQALYSAKGA GRNCVMVHGR QSPRGAVRTA
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