Gene PP_0362 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPP_0362 
SymbolbioB 
ID1044069 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida KT2440 
KingdomBacteria 
Replicon accessionNC_002947 
Strand
Start bp440059 
End bp441117 
Gene Length1059 bp 
Protein Length352 aa 
Translation table11 
GC content63% 
IMG OID637143741 
Productbiotin synthase 
Protein accessionNP_742529 
Protein GI26987104 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0502] Biotin synthase and related enzymes 
TIGRFAM ID[TIGR00433] biotin synthetase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.309451 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGCCA GCACAACTGC AACAACACGT CACGATTGGG CCCTGGCCGA GGTCAAGGCG 
CTGTTCCAGC AACCGTTCAA TGACTTGCTG TTCCAGGCGC AGACCGTGCA CCGCGCGCAT
TTCGACCCCA ACCGCGTGCA GGTTTCGACG TTGCTGTCGA TCAAGACCGG CGCCTGCCCG
GAAGATTGCA AATATTGTCC GCAGTCCGGT CACTACAACA CCGGCCTGGA GAAACAGAAG
CTGATGGAAG TGCAGAAGGT GCTGGAAGAA GCTGCCCGCG CCAAAGCCAT CGGTTCTACC
CGTTTCTGCA TGGGGGCGGC GTGGAAGCAC CCGTCGGCCA AAGACATGCC CTACGTGCTG
GAGATGGTCA AAGGCGTCAA GGCCATGGGC CTGGAAACCT GCATGACCCT CGGCAAACTC
GACCAGGAGC AGACCAAGGC CCTGGCCCAG GCTGGTCTGG ACTACTACAA CCACAACCTC
GACACCTCGC CGGAGTTCTA CGGCAGCATC ATCACCACGC GTACCTACAG CGAGCGCCTG
CAGACCCTGG CCTACGTGCG CGACGCCGGG ATGAAAATCT GCTCTGGTGG CATTCTGGGC
ATGGGTGAAT CGCTGGATGA CCGCGCCGGC CTGCTGATCC AGCTGGCCAA CCTGCCGGAA
CACCCGGAGT CGGTGCCGAT CAACATGCTG GTCAAGGTGG CCGGCACGCC GCTGGCTGAG
GAAGAGGACG TCGACCCGTT CGACTTTATC CGTATGCTGG CCGTGGCCCG GATCCTCATG
CCCAAGTCTC ACGTGCGCCT GTCCGCCGGC CGCGAGCAGA TGAACGAGCA GATGCAGGCC
CTGGCCTTCA TGGCGGGCGC CAACTCGATC TTCTACGGCG AAAAGCTGCT GACCACCGCC
AACCCCCAGG CCGACAAGGA CATGCAGCTG TTCGCACGCC TGGGCATCAA GCCCGAAGCG
CGTGAAGAGC ACGCCGACGA AGTGCACCAG GCAGCCATCG AGCAAGCGCT GGTCGAGCAG
CGCAGCAGCG AGATGTTCTA CGACGCCGCG ACAGCCTGA
 
Protein sequence
MSASTTATTR HDWALAEVKA LFQQPFNDLL FQAQTVHRAH FDPNRVQVST LLSIKTGACP 
EDCKYCPQSG HYNTGLEKQK LMEVQKVLEE AARAKAIGST RFCMGAAWKH PSAKDMPYVL
EMVKGVKAMG LETCMTLGKL DQEQTKALAQ AGLDYYNHNL DTSPEFYGSI ITTRTYSERL
QTLAYVRDAG MKICSGGILG MGESLDDRAG LLIQLANLPE HPESVPINML VKVAGTPLAE
EEDVDPFDFI RMLAVARILM PKSHVRLSAG REQMNEQMQA LAFMAGANSI FYGEKLLTTA
NPQADKDMQL FARLGIKPEA REEHADEVHQ AAIEQALVEQ RSSEMFYDAA TA