Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PP_0343 |
Symbol | waaG |
ID | 1044049 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida KT2440 |
Kingdom | Bacteria |
Replicon accession | NC_002947 |
Strand | + |
Start bp | 416290 |
End bp | 417414 |
Gene Length | 1125 bp |
Protein Length | 374 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 637143722 |
Product | lipopolysaccharide core biosynthesis protein WaaG |
Protein accession | NP_742510 |
Protein GI | 26987085 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0438] Glycosyltransferase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.213865 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.829668 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAACTGG CTTTCGTGCT TTACAAATAT TTCCCCTTCG GCGGGCTGCA GCGCGATTTC ATGCGCATTG CCCTGGAATG CCAGAAGCGG GGCCACCAGA TCCGTGTGTA TACGCTGATC TGGGAGGGTG ACATTCCGCC GGGCTTCGAA GTGCTGGTGG CGCCGGTGAA GGCGATTTTC AACCACCGCC GCAACGAGAA GCTCAGCGCC TGGATGGCCG CCGACCTGGC CAAGCGCCCG GTCGACCGCC TGATCGGCTT CAACAAGATG CCAGGGCTGG ACGTGTACTA CGCCGCCGAC GGCTGCTTCG AAGACAAGGC GCAGACCCTG CGCGGTGGGC TGTACCGCCG CTGGGGCCGC TACCGGCACT TTGCCGAGTA CGAGCGTGCG GTGTTTGCCA AGGACGCCCA TACCGAAGTG CTGATGATTT CCGAAGTGCA GCAGCCGCTG TTCATCAAGC ATTACGGCAC CCCGGTAGAA CGTTTCCACC TCCTGCCGCC AGGCATTTCC CAGGATCGCC GTGCGCCGGC CAATGCCGCC GAGATCCGCG CTGAGTTCCG CAAGGAATTC AACCTGGGGG ATGACGACCT GCTGCTGGTG CAGATTGGCT CAGGCTTCAA GACCAAAGGC GTGGACCGCA GCCTCAAGGC ACTGGCTGCG CTGCCGTCAG CCCTGCGCAA ACGCACCAGG CTGATGGTGA TCGGCCAGGA CGACCCCAAG GTATTCCAGC TGCAAAGCGC TACCCTGGGC TTGGGCGACC AGGTGCAGTT TCTCAAGGGC CGCAGCGATA TCCCGCGCTT CCTGCTGGGC GCCGACCTGC TGATTCACCC GGCGTACAAC GAGAATACCG GTACGGTGCT GCTCGAAGCG TTGGTCGCCG GCTTGCCGGT GCTGGTGTCC AAGGTGTGCG GTTATGCCCA CTACATTGCC GAGGCCGACA GCGGCCTGGT GCTGGACGAG CCGTTCGAAC AAGAGCAGCT CAACGGCTAT CTGCAGCGCA TGCTCGAAGA CCCGCAGGCG CGTGCCAGCT GGTCGCGCAA TGGCCTGGCA TTTGCTGATA GCGCCGATCT GTACAGCATG CCGCAGCATG CTGCCGACGT GATCCTGGGG CAAAAAACCG CATGA
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Protein sequence | MQLAFVLYKY FPFGGLQRDF MRIALECQKR GHQIRVYTLI WEGDIPPGFE VLVAPVKAIF NHRRNEKLSA WMAADLAKRP VDRLIGFNKM PGLDVYYAAD GCFEDKAQTL RGGLYRRWGR YRHFAEYERA VFAKDAHTEV LMISEVQQPL FIKHYGTPVE RFHLLPPGIS QDRRAPANAA EIRAEFRKEF NLGDDDLLLV QIGSGFKTKG VDRSLKALAA LPSALRKRTR LMVIGQDDPK VFQLQSATLG LGDQVQFLKG RSDIPRFLLG ADLLIHPAYN ENTGTVLLEA LVAGLPVLVS KVCGYAHYIA EADSGLVLDE PFEQEQLNGY LQRMLEDPQA RASWSRNGLA FADSADLYSM PQHAADVILG QKTA
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