Gene PP_0343 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPP_0343 
SymbolwaaG 
ID1044049 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida KT2440 
KingdomBacteria 
Replicon accessionNC_002947 
Strand
Start bp416290 
End bp417414 
Gene Length1125 bp 
Protein Length374 aa 
Translation table11 
GC content63% 
IMG OID637143722 
Productlipopolysaccharide core biosynthesis protein WaaG 
Protein accessionNP_742510 
Protein GI26987085 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0438] Glycosyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.213865 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.829668 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAACTGG CTTTCGTGCT TTACAAATAT TTCCCCTTCG GCGGGCTGCA GCGCGATTTC 
ATGCGCATTG CCCTGGAATG CCAGAAGCGG GGCCACCAGA TCCGTGTGTA TACGCTGATC
TGGGAGGGTG ACATTCCGCC GGGCTTCGAA GTGCTGGTGG CGCCGGTGAA GGCGATTTTC
AACCACCGCC GCAACGAGAA GCTCAGCGCC TGGATGGCCG CCGACCTGGC CAAGCGCCCG
GTCGACCGCC TGATCGGCTT CAACAAGATG CCAGGGCTGG ACGTGTACTA CGCCGCCGAC
GGCTGCTTCG AAGACAAGGC GCAGACCCTG CGCGGTGGGC TGTACCGCCG CTGGGGCCGC
TACCGGCACT TTGCCGAGTA CGAGCGTGCG GTGTTTGCCA AGGACGCCCA TACCGAAGTG
CTGATGATTT CCGAAGTGCA GCAGCCGCTG TTCATCAAGC ATTACGGCAC CCCGGTAGAA
CGTTTCCACC TCCTGCCGCC AGGCATTTCC CAGGATCGCC GTGCGCCGGC CAATGCCGCC
GAGATCCGCG CTGAGTTCCG CAAGGAATTC AACCTGGGGG ATGACGACCT GCTGCTGGTG
CAGATTGGCT CAGGCTTCAA GACCAAAGGC GTGGACCGCA GCCTCAAGGC ACTGGCTGCG
CTGCCGTCAG CCCTGCGCAA ACGCACCAGG CTGATGGTGA TCGGCCAGGA CGACCCCAAG
GTATTCCAGC TGCAAAGCGC TACCCTGGGC TTGGGCGACC AGGTGCAGTT TCTCAAGGGC
CGCAGCGATA TCCCGCGCTT CCTGCTGGGC GCCGACCTGC TGATTCACCC GGCGTACAAC
GAGAATACCG GTACGGTGCT GCTCGAAGCG TTGGTCGCCG GCTTGCCGGT GCTGGTGTCC
AAGGTGTGCG GTTATGCCCA CTACATTGCC GAGGCCGACA GCGGCCTGGT GCTGGACGAG
CCGTTCGAAC AAGAGCAGCT CAACGGCTAT CTGCAGCGCA TGCTCGAAGA CCCGCAGGCG
CGTGCCAGCT GGTCGCGCAA TGGCCTGGCA TTTGCTGATA GCGCCGATCT GTACAGCATG
CCGCAGCATG CTGCCGACGT GATCCTGGGG CAAAAAACCG CATGA
 
Protein sequence
MQLAFVLYKY FPFGGLQRDF MRIALECQKR GHQIRVYTLI WEGDIPPGFE VLVAPVKAIF 
NHRRNEKLSA WMAADLAKRP VDRLIGFNKM PGLDVYYAAD GCFEDKAQTL RGGLYRRWGR
YRHFAEYERA VFAKDAHTEV LMISEVQQPL FIKHYGTPVE RFHLLPPGIS QDRRAPANAA
EIRAEFRKEF NLGDDDLLLV QIGSGFKTKG VDRSLKALAA LPSALRKRTR LMVIGQDDPK
VFQLQSATLG LGDQVQFLKG RSDIPRFLLG ADLLIHPAYN ENTGTVLLEA LVAGLPVLVS
KVCGYAHYIA EADSGLVLDE PFEQEQLNGY LQRMLEDPQA RASWSRNGLA FADSADLYSM
PQHAADVILG QKTA