Gene PP_0340 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPP_0340 
SymbolglnE 
ID1044045 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida KT2440 
KingdomBacteria 
Replicon accessionNC_002947 
Strand
Start bp411046 
End bp413979 
Gene Length2934 bp 
Protein Length977 aa 
Translation table11 
GC content65% 
IMG OID637143719 
Productbifunctional glutamine-synthetase adenylyltransferase/deadenyltransferase 
Protein accessionNP_742507 
Protein GI26987082 
COG category[O] Posttranslational modification, protein turnover, chaperones
[T] Signal transduction mechanisms 
COG ID[COG1391] Glutamine synthetase adenylyltransferase 
TIGRFAM ID[TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.95595 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCCTAC CTTTGCCCTC CGATCTGCCT GCCACCTTGC AGCCGCTGGT CACTCGCAAC 
CAGCAGTTCA TCAGCGATGC CGTGGCCGGC CACCCCGAAC TCGACCTGCA GGCCTGGAGC
CCGCTGCACC GGCAGCAGTT CGATCAGGTG GCTGCTGCCA GTGAATTCGT GCTCAGTTTG
GCCCAGCGCG AGCCCGCCAT GCTGTTCGCC CTGCTGGCCA GCGGCGAGCT GGAGCGGCGT
TACGCCCCGG GTGAGCTGCG CGGGCAAATC GCCGCAACAG CCCAGGCGGC ACAGAGCGAG
GACGAGCTGG CGCGCAATCT GCGCCGCGCG CGCAACCGCC AGCAGCTGCG CATTATCTGG
CGCGACATTA CCCGTCAGGC GGAACTTGGC GAAACCTGCC GTGACCTGTC GGACCTTGCC
GATGCGGCCA TCGACGAAGC CTACCAATGG CTGTACCCGC GTCATTGCCA GCAATTCGGC
ACGCCCATCG GCAACCGCAG CGGCCAGCCG CAGCACATGG TGGTGCTGGG CATGGGCAAG
CTGGGAGCGG TAGAGCTTAA CCTGTCGTCG GACATCGACC TGATCTTCGG CTTCCCCGAG
GGCGGTGAAA CCGAAGGGGT GAAGCGCTCG CTGGACAACC AGGAGTTCTT CACGCGCCTG
GGCCAAAGGC TGATCAAGGC ACTGGACCCG GTTACCGTCG ACGGCTTTGT GTTCCGCGTT
GACATGCGCC TGCGTCCCTA TGGTTCGGCG GGTGCCCTGG TGCTCAGCTT CAATGCACTG
GAGCAGTACT ACCAGGACCA GGGCCGTGAC TGGGAACGTT ACGCGATGAT CAAGGCGCGG
GTGGTGGCCG GCGACCAGGC GGCCGGCGCG CAGTTGCAGG AGATGCTGCG CCCGTTCGTG
TACCGCCGCT ACCTGGACTT TTCCGCAATC GAAGCGCTGC GCACCATGAA GCAGCTGATC
CAGCAGGAAG TGCGGCGCAA GGGCATGGCC GAGAACATCA AGCTGGGTGC CGGTGGTATT
CGCGAAGTAG AGTTCATCGC CCAAGCCTTC CAGCTGATCC ACGGCGGGCG TGACCTCAGC
CTGCAGCAGC GGCCGTTGCT CAAGGTGCTG GCCACCCTGG AAGGCCAAGG CTACCTGCCG
CCAGCAGTGG TGGCCGAGTT GCGCGAGGGT TATGAGTTCC TGCGGTACAC CGAGCACGCG
ATCCAGGCCA TTGCCGACCG CCAGACGCAA ATGTTGCCGG AAGGTGAGAC CGATCAGGCA
CGCGTGGCCT ACGTGCTCGG TTTTGCCGAC TGGCAGAGCT TCCACGACCA GTTGATGTAC
TGGCGTGGCC GTATCGACTG GCATTTCCGC CAGGTCATTG CCGACCCGGA TGATGAAGAC
GGCGAAGGCG AACTGGTGGT GGGTGGCGAG TGGTCGCCGT TGTGGGAGCA GGCGCAGGAT
GAAGAAGCCG CTGGCCGGCA ATTGCAAGAG GCTGGCTTCA AGCAACCCGC CGAAGCCTTG
AGGCGCCTGG CCGGGCTGCG TTCCAGCCCG CAGTTGCGCT CGATGCAGCG CATCGGCCGT
GAGCGACTTG ACGCATTCAT CCCACGGCTG CTGGCCCAGG CGGTGGAGCA TGACAACCCC
GACCTGGTGC TGGAGCGGGT GTTGCCATTG GTCGAGGCTG TGGCAAGGCG TTCTGCCTAC
CTGGTACTGC TGACCGAAAA CCCCGGTGCC CTGCGCCGTT TGCTGACGCT GTGCGCCGCC
AGCCCGTGGA TTGCCGAGCA GATTGCCCTT TACCCGCTGC TGCTCGACGA ACTGCTCAAT
GAGGGCCGCT TGTTCAGCCC GCCCTTGGCG CCAGAACTGG CCAGCGAGCT GCGCGAGCGC
CTGACGCGCA TCCCCGAGGA CGACCTGGAG CAGCAGATGG AGGCGCTGCG CCATTTCAAG
CTGGCCCACA GCCTGCGCGT GGCCGCCTCG GAAATCAGCG GCAACCTGCC GTTGATGAAA
GTCAGCGACT ACCTGACCTG GCTGGCTGAA GCCATCCTCG ACCAGGTGCT GGCCCTGGCC
TGGCGCCAGA CCGTGGCCCG CCACGGCCAA CCCAAGCGCA GCGACGGCAG CCTGTGCGAC
CCGGGTTTCA TCATTATCGG TTACGGCAAG ATGGGCGGCC TGGAGCTCGG CCACGGTTCG
GACCTGGACC TGGTCTTCAT CCATGACGGC GATCCGCAGG CGGAAACCGA CGGTGCGAAG
CCTATCGACA GCGCGCAGTT CTTCACGCGT CTGGGGCAGC GCATCATCCA CTTGCTGACC
ACCCAGACCA ACTCGGGCCA ACTGTACGAC GTGGATATGC GCCTGCGCCC GTCCGGCGCC
TCGGGCCTGC TGGTCAGCTC GCTGGGCGCC TTCGAACGCT ACCAGCAGAA CGAAGCCTGG
ACCTGGGAAC ACCAGGCGCT GGTACGGGCC CGTGTGCTGG TGGGTTGCAA GCAGGTGGGG
GCGGCATTCG AAGGTGTGCG CGCCAAGGTA CTGGGCCAGG CCCGCGACCT GGAAAAGCTG
CGCGGCGAGG TGAGTGAAAT GCGCGCCAAG ATGCGTGACA ACCTCGGTAC CAAGGCGACG
GCTGCCGGTA CCGCGGCGAA CGCCTTCGAC GCCGGTGTAC CCTTCGATAT CAAGCAGGAT
GCCGGCGGTA TCGTCGATAT CGAATTTATG GTGCAATACG CCGCTTTGGC CTGGTCCCAT
GACCATCCGG CCATACTTCG ATGGACCGAT AACATCCGCA TTCTGGAAGA GCTGGAGCAG
GCGAACCTGA TGCCGGCCAG TGACGCGGTG CTGTTGCGTG AAGTGTACAA AGCGTTCCGC
TCGGCCTCCC ACCGCCAGGC CCTGCAGAAG GAGGCCGGGG TGATCGATGC GGCACAGTTT
GCCGATGAAC GCCGTGAAGT GCGGCGGATC TGGGGTGAGT TGGGTTTAAG CTGA
 
Protein sequence
MRLPLPSDLP ATLQPLVTRN QQFISDAVAG HPELDLQAWS PLHRQQFDQV AAASEFVLSL 
AQREPAMLFA LLASGELERR YAPGELRGQI AATAQAAQSE DELARNLRRA RNRQQLRIIW
RDITRQAELG ETCRDLSDLA DAAIDEAYQW LYPRHCQQFG TPIGNRSGQP QHMVVLGMGK
LGAVELNLSS DIDLIFGFPE GGETEGVKRS LDNQEFFTRL GQRLIKALDP VTVDGFVFRV
DMRLRPYGSA GALVLSFNAL EQYYQDQGRD WERYAMIKAR VVAGDQAAGA QLQEMLRPFV
YRRYLDFSAI EALRTMKQLI QQEVRRKGMA ENIKLGAGGI REVEFIAQAF QLIHGGRDLS
LQQRPLLKVL ATLEGQGYLP PAVVAELREG YEFLRYTEHA IQAIADRQTQ MLPEGETDQA
RVAYVLGFAD WQSFHDQLMY WRGRIDWHFR QVIADPDDED GEGELVVGGE WSPLWEQAQD
EEAAGRQLQE AGFKQPAEAL RRLAGLRSSP QLRSMQRIGR ERLDAFIPRL LAQAVEHDNP
DLVLERVLPL VEAVARRSAY LVLLTENPGA LRRLLTLCAA SPWIAEQIAL YPLLLDELLN
EGRLFSPPLA PELASELRER LTRIPEDDLE QQMEALRHFK LAHSLRVAAS EISGNLPLMK
VSDYLTWLAE AILDQVLALA WRQTVARHGQ PKRSDGSLCD PGFIIIGYGK MGGLELGHGS
DLDLVFIHDG DPQAETDGAK PIDSAQFFTR LGQRIIHLLT TQTNSGQLYD VDMRLRPSGA
SGLLVSSLGA FERYQQNEAW TWEHQALVRA RVLVGCKQVG AAFEGVRAKV LGQARDLEKL
RGEVSEMRAK MRDNLGTKAT AAGTAANAFD AGVPFDIKQD AGGIVDIEFM VQYAALAWSH
DHPAILRWTD NIRILEELEQ ANLMPASDAV LLREVYKAFR SASHRQALQK EAGVIDAAQF
ADERREVRRI WGELGLS