| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_0338 |
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| Symbol | aceF |
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| ID | 1044041 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida KT2440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002947 |
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| Strand | - |
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| Start bp | 406363 |
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| End bp | 408003 |
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| Gene Length | 1641 bp |
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| Protein Length | 546 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637143717 |
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| Product | dihydrolipoamide acetyltransferase |
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| Protein accession | NP_742505 |
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| Protein GI | 26987080 |
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| COG category | [C] Energy production and conversion
[I] Lipid transport and metabolism |
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| COG ID | [COG0508] Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes
[COG0511] Biotin carboxyl carrier protein |
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| TIGRFAM ID | [TIGR01348] pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase, long form |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.617034 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAGCGAAC TCATTCGCGT ACCTGACATC GGCAGCGGTG AAGGTGAAAT CATCGAGCTG
TTCGTCAAGG TCGGTGACCG TATCGAGGCT GACCAGAGCC TGCTGACCCT GGAGTCCGAC
AAGGCCTCCA TGGAAATTCC GGCGCCCAAG GCTGGCGTGA TCAAGGAACT GAAGGTCAAG
CTGGGCGACC GCCTGAAAGA AGGCGACGAA CTGCTGGTCC TGGAAGCCGA GGGCGCCGCT
GCTGCGGCCC CTGAGGCGCC GGCTGCTGCC GCTGCTCCGG CTGCGGCGCC AGCGCCAGCC
GCTGAAGCCG CTCCTGCTGC TCCGGCCGCA GCCCCGGCTG CTGCCAGCGT GCAGGACATC
CACGTGCCGG ACATCGGTTC GTCGGGCAAG GCCAAGATCA TCGAAGTGCT GGTCAAAGTC
GGCGACACCG TCGAAGCCGA CCAGTCGCTG ATTACCCTGG AGTCCGACAA GGCCTCCATG
GAAATCCCGT CGCCGGCTGC CGGCGTGGTC GAAGAAGTGC TGTGCAAGCT GGAAGACGAA
GTCGGCACTG GCGACCTGAT CTTCAAGCTG AAAGTGGCGG GTGCCGCCCC GGCTGCCGCG
CCGGCACCGG CTGCTGCTCC TGCACCAGCC AAGGCTGAGG CTGCTCCGGC TGCCGCACCT
GCCGCTGCCG CCCCGGCTGC TGCCCCTGCA CCGGCTGCTA CCGCACCGGC CGCTGGCAGC
AATGCCAAGG TTCACGCAGG CCCCGCTGTT CGTCAGCTGG CCCGTGAATT CGGTGTCGAG
CTGGGTGCAG TTGCTGCCAC CGGCCCGCAC GGTCGCATCC TGAAAGAAGA CGTGCAGGTC
TACGTCAAGG CCATGATGCA GAAGGCCAAG GAAGCGCCGG CAGCCGCCGG TGCGACCGGT
GGTGCTGGCA TCCCGCCGAT CCCTGCCGTG GACTTCAGCA AGTTCGGTGA AGTGGAAGAA
GTGGCCCTGA CCCGCCTGAT GCAGGTCGGT GCTGCCAACC TGCACCGCAG CTGGCTCAAC
GTGCCGCACG TGACCCAGTT CGACTCTGCC GACATCACCG AGCTGGAAGC CTTCCGCGTT
GCGCAGAAGG CCGTGGCCGA GAAGGCTGGG GTGAAGCTGA CCGTGCTGCC ACTGCTGCTC
AAGGCCTGCG CCTTCCTGCT CAAGGAACTG CCGGACTTCA ACAGCTCGCT GGCGCCAAGC
GGCAAGGCCA TCATCCGCAA GAAGTACGTG CACATCGGCT TCGCCGTGGA CACCCCGGAC
GGCCTGCTGG TCCCTGTGAT CAAGAACGTC GACCAGAAGA GCCTGCTGCA ACTGGCTGCC
GAAGCCGCTG CACTGGCCGA GAAGGCGCGC ACCAAGAAGC TGTCGGCTGA CGAGATGCAA
GGCGCCTGCT TCACCATCTC CAGCCTCGGC CACATTGGCG GCACCGGCTT CACGCCGATC
GTCAATGCGC CGGAGGTGGC TATCCTGGGC GTCTCCAAGG CGACCATGCA GCCAGTCTGG
GATGGCAAGG CCTTCCAGCC AAAGCTGATG TTGCCGCTGT CGCTGTCCTA CGATCACCGT
GTGATCAACG GCGCTGCCGC CGCGCGCTTC ACCAAGCGCC TGGGCGACGT GCTGGGCGAT
ATCCGCACCA TGCTGCTGTA A
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| Protein sequence | MSELIRVPDI GSGEGEIIEL FVKVGDRIEA DQSLLTLESD KASMEIPAPK AGVIKELKVK
LGDRLKEGDE LLVLEAEGAA AAAPEAPAAA AAPAAAPAPA AEAAPAAPAA APAAASVQDI
HVPDIGSSGK AKIIEVLVKV GDTVEADQSL ITLESDKASM EIPSPAAGVV EEVLCKLEDE
VGTGDLIFKL KVAGAAPAAA PAPAAAPAPA KAEAAPAAAP AAAAPAAAPA PAATAPAAGS
NAKVHAGPAV RQLAREFGVE LGAVAATGPH GRILKEDVQV YVKAMMQKAK EAPAAAGATG
GAGIPPIPAV DFSKFGEVEE VALTRLMQVG AANLHRSWLN VPHVTQFDSA DITELEAFRV
AQKAVAEKAG VKLTVLPLLL KACAFLLKEL PDFNSSLAPS GKAIIRKKYV HIGFAVDTPD
GLLVPVIKNV DQKSLLQLAA EAAALAEKAR TKKLSADEMQ GACFTISSLG HIGGTGFTPI
VNAPEVAILG VSKATMQPVW DGKAFQPKLM LPLSLSYDHR VINGAAAARF TKRLGDVLGD
IRTMLL
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