Gene PP_0326 details

Gene Information

• Locus tag: PP_0326
• Symbol: soxG
• ID: 1044024
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pseudomonas putida KT2440
• Kingdom: Bacteria
• Replicon accession: NC_002947
• Strand: +
• Start bp: 392814
• End bp: 393446
• Gene Length: 633 bp
• Protein Length: 210 aa
• Translation table: 11
• GC content: 63%
• IMG OID: 637143705
• Product: sarcosine oxidase, gamma subunit family
• Protein accession: NP_742493
• Protein GI: 26987068
• COG category: [E] Amino acid transport and metabolism
• COG ID: [COG4583] Sarcosine oxidase gamma subunit
• TIGRFAM ID: [TIGR01375] sarcosine oxidase, gamma subunit family, heterotetrameric form

Plasmid Coverage information

• Num covering plasmid clones: 13
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 9
• Fosmid unclonability p-value: 0.0654749
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGAGCGCTA TCAACGTCTT CCAGCAAAAC CCCGGCGCCG AGGCCAAAGC CCAGTCGCCA 
CTGCACCATG CCGACCTGGC CAGCCTGGTA GGCAAAGGCC GCAAGAACGC AGGCGTGACC 
CTGCGTGAAC GCAAGTTCCT CGGTCACCTC ACCCTGCGTG GTGATGGCCA CAACCCGGAA 
TTTGCCGCCG GCGTGCACAA GGCCCTTGGC CTGGAGCTGC CCGTGGCGCT GACCGTGGTC 
GCCAACAAGG ACATGTCGCT GCAATGGGTC GGCCCAGATG AGTGGCTGCT GATCGTGCCC 
GGCGGCCAGG AGCTGGCAGC GGAGCAAAAG CTGCGCGCGG CCCTTGAAGG CCAGCACATT 
CAGGTCGTCA ATGTCAGTGG CGGGCAAAGC CTGCTGGAAC TGCGCGGCCC GAATGTGCGC 
GACGTGCTGA TGAAATCCAC CAGCTATGAT GTTCACCCGA ACAACTTCCC GGTGGGCAAG 
GCCGTGGGCA CCGTGTTCGC CAAGTCGCAA CTGGTGATCC GCCGCACTGC AGAAGACACT 
TGGGAGCTGG TGATTCGCCG CAGCTTCGCC GATTACTGGT GGCTGTGGCT GCAGGACGCT 
TCTGCCGAAT ACGGCCTGAG CATCGAAGCC TAA 

 

Protein sequence

MSAINVFQQN PGAEAKAQSP LHHADLASLV GKGRKNAGVT LRERKFLGHL TLRGDGHNPE 
FAAGVHKALG LELPVALTVV ANKDMSLQWV GPDEWLLIVP GGQELAAEQK LRAALEGQHI 
QVVNVSGGQS LLELRGPNVR DVLMKSTSYD VHPNNFPVGK AVGTVFAKSQ LVIRRTAEDT 
WELVIRRSFA DYWWLWLQDA SAEYGLSIEA