| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_0324 |
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| Symbol | soxD |
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| ID | 1044022 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida KT2440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002947 |
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| Strand | + |
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| Start bp | 389393 |
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| End bp | 389728 |
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| Gene Length | 336 bp |
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| Protein Length | 111 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637143703 |
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| Product | sarcosine oxidase, delta subunit family |
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| Protein accession | NP_742491 |
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| Protein GI | 26987066 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG4311] Sarcosine oxidase delta subunit |
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| TIGRFAM ID | [TIGR01374] sarcosine oxidase, delta subunit family, heterotetrameric form |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.434954 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.014081 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTTGCATA TTTTCTGTCC CCACTGCGGC GAGCTGCGCT CCGAAGAAGA GTTCCACGCC
TCTGGCCAGG CGCACATTGC CCGCCCGCTG GACCCTAACG CCTGCTCCGA CGAGGAGTGG
GGTACCTACA TGTTCTACCG TGACAACCCG CGCGGTATTC ACCATGAACT GTGGGACCAC
GTTGCCGGCT GCCGCCAGTA CTTCAACGTC ACCCGTGACA CCGTGACCTA CGAAATTCTG
GAAACCTACA AGATTGGCGA GAAGCCGCAA GTGACCGCCA GCGGCAAAGC CACCAGCGCC
GCGTCGACCG TCAAAGGCCA AGGGGAAAAA GTATGA
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| Protein sequence | MLHIFCPHCG ELRSEEEFHA SGQAHIARPL DPNACSDEEW GTYMFYRDNP RGIHHELWDH
VAGCRQYFNV TRDTVTYEIL ETYKIGEKPQ VTASGKATSA ASTVKGQGEK V
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