| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_0310 |
|---|
| Symbol | |
|---|
| ID | 1044003 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida KT2440 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_002947 |
|---|
| Strand | + |
|---|
| Start bp | 370518 |
|---|
| End bp | 372578 |
|---|
| Gene Length | 2061 bp |
|---|
| Protein Length | 686 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 637143689 |
|---|
| Product | oxidoreductase, FMN-binding |
|---|
| Protein accession | NP_742477 |
|---|
| Protein GI | 26987052 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1902] NADH:flavin oxidoreductases, Old Yellow Enzyme family |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 0 |
|---|
| Plasmid unclonability p-value | 0.019532 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 5 |
|---|
| Fosmid unclonability p-value | 0.00413942 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGGCATTCG AAGCAATGTT CCAGCCGATC CAGATCGGCA AACTGACCAT CCGCAACCGT
GTGCTCAGCA CCGCGCATGC CGAGGTCTAC GCCACTGACG GCGGCATGAC GACCGACCGC
TATGTGAAGT ACTACGAAGA GAAGGCCAAG GGCGGCATCG GCCTGGCCAT CTGTGGCGGC
TCGTCGGTGG TGGCCATCGA CAGCCCGCAG GAATGGTGGG CATCGGTCAA CCTGTCGACC
GACCGCATCA TCCCGCACTT CCAGAACCTT GCCGACGCCA TGCACAAGCA TGGCGCCAAG
ATCATGATCC AGATTACCCA CATGGGCCGT CGCTCGCGCT GGGACGGCTT CAACTGGCCG
ACGCTGATGT CGCCATCGGG CATTCGCGAA CCTGTGCACC GCGCCACCTG CAAAACCATC
GAGGTGGAAG AGATCTGGCG GGTAATCGGC AACTACGCGC AGGCTGCGCG TCGCGCCAAA
GAGGGCGGCC TGGACGGCGT GGAATTGTCG GCAGTGCACC AGCACATGAT CGACCAGTTC
TGGAGCCCAC GGGTCAACAA GCGTACCGAC GAATGGGGCG GCACCTTTGA AGGCCGCATG
AAATTCGGCC TTGAAGTATT GAAAGCCGTA CGCGCCGAAG TGGGTGACGA CTTCTGCGTG
GGCATGCGTA TCTGCGGTGA CGAGTTCCAC CCTGATGGCC TCAGCCACGA GGACATGAAG
CAGATCGCTG CCTACTACGA CGCCACTGGC ATGCTCGACT TCATCGGCGT GGTCGGCTCG
GGTTGCGATA CTCATAACAC CTTGGCCAAC GTCATCCCCA ACATGAGCTA CCCGCCGGAG
CCGTTCCTGC ACCTGGCAGC CGGTATCAAG GAGGTGGTCA AGGTCCCGGT GCTGCACGCG
CAGAACATCA AAGACCCGAA CCAGGCCACG CGCATCCTTG AAGGCGGCTA CGTGGACATG
GTCGGCATGA CCCGTGCGCA CATGGCCGAC CCGCACCTGA TCGCCAAGAT CAAGATGGGC
CAGATCGACC AGATCAAGCA GTGCGTCGGT GCCAACTACT GCATCGACCG CCAGTACCAG
GGCCTGGATG TGCTGTGCAT CCAGAACGCC GCGACCTCCC GTGAGTACAT GGGTGTGCCG
CACATCATCG AGAAGACCAC CGGCGTCAAG CGCAAGGTGG TGGTGGTTGG CGCAGGCCCT
GCCGGCATGG AAGCGGCCCG CGTGGCTGCT GAACGCGGCC ACGACGTGAC CCTGTTCGAG
AAGAGGGACC AGATTGGCGG GCAGATCACC ATTGCCGCCA AGGCCCCGCA GCGTGACCAG
ATTGCCGGTA TCACCCGCTG GTACCAGCTT GAGCTGGCTC GCCTGAAAGT TGACTTGCGC
CTGGGCACTG CCGCTGATGT GGCCGCCATC CAGGACCTGC GCCCGGACGT CATCGTGCTG
GCCGTAGGTG GGCACTCGTT CCTGGAGCAG AACGAGCACT GGGGCGCCGC TGAAGGGCTG
GTGGTCAGCA GCTGGGATGT GCTCGATGGC AAGGTAGCGC CGGGCAAGAA CGTGCTGGTG
TACGACACCA TCTGCGAATT CACCGGTATG TCGGTCGCTG ACTTCATCGC TGACAAGGGC
AGCCAGGTCG AGATCGTCAC CGACGACATC AAGCCAGGCG TGGCCATGGG CGGTACCACC
TTCCCCACCT ACTACCGCAG CATGTACCCC AAAGAAGTGA TCATGACCGG CGACATGATG
CTGGAAAAGG TCTACCGCGA AGGCGACAAG CTGGTGGCGG TACTGGAGAA CGAATACACC
GGCGCCAAGG AAGAGCGCGT GGTCGATCAA GTCGTGGTTG AGAACGGCGT GCGCCCTGAC
GAAGAGCTGT ACTACGCGCT CAAGGAAGGT TCGCGCAACA AGGGCCAGAT CGACGTGGAG
GCGCTGTTCG CCATCAAGCC ACAGCCGATC CTCAGCCAGC CGGGCGAAGG CTACCTGCTG
TACCGCATCG GCGACTGCGT GGCCCAGCGC AACGTGCATG CGGCGATCTA CGACGCCTTG
CGCCTGTGCA AGGACTTCTG A
|
|---|
| Protein sequence | MAFEAMFQPI QIGKLTIRNR VLSTAHAEVY ATDGGMTTDR YVKYYEEKAK GGIGLAICGG
SSVVAIDSPQ EWWASVNLST DRIIPHFQNL ADAMHKHGAK IMIQITHMGR RSRWDGFNWP
TLMSPSGIRE PVHRATCKTI EVEEIWRVIG NYAQAARRAK EGGLDGVELS AVHQHMIDQF
WSPRVNKRTD EWGGTFEGRM KFGLEVLKAV RAEVGDDFCV GMRICGDEFH PDGLSHEDMK
QIAAYYDATG MLDFIGVVGS GCDTHNTLAN VIPNMSYPPE PFLHLAAGIK EVVKVPVLHA
QNIKDPNQAT RILEGGYVDM VGMTRAHMAD PHLIAKIKMG QIDQIKQCVG ANYCIDRQYQ
GLDVLCIQNA ATSREYMGVP HIIEKTTGVK RKVVVVGAGP AGMEAARVAA ERGHDVTLFE
KRDQIGGQIT IAAKAPQRDQ IAGITRWYQL ELARLKVDLR LGTAADVAAI QDLRPDVIVL
AVGGHSFLEQ NEHWGAAEGL VVSSWDVLDG KVAPGKNVLV YDTICEFTGM SVADFIADKG
SQVEIVTDDI KPGVAMGGTT FPTYYRSMYP KEVIMTGDMM LEKVYREGDK LVAVLENEYT
GAKEERVVDQ VVVENGVRPD EELYYALKEG SRNKGQIDVE ALFAIKPQPI LSQPGEGYLL
YRIGDCVAQR NVHAAIYDAL RLCKDF
|
|---|
| |