| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_0295 |
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| Symbol | |
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| ID | 1043983 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida KT2440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002947 |
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| Strand | - |
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| Start bp | 354324 |
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| End bp | 355169 |
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| Gene Length | 846 bp |
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| Protein Length | 281 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637143674 |
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| Product | glycine betaine/L-proline ABC transporter, permease protein |
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| Protein accession | NP_742462 |
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| Protein GI | 26987037 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG4176] ABC-type proline/glycine betaine transport system, permease component |
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| TIGRFAM ID | [TIGR03416] choline ABC transporter, permease protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.698088 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 2 |
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| Fosmid unclonability p-value | 0.0000339096 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCTTATCG ATCAGAAAAT ACCCCTGGGC CAGTACATCG CGTCGTTCGT CGAATGGCTG
ACCCAGAACG GCGCGAATTA CTTCGACGCC ATCGCGCAAG GCCTGGAGTT CATGATCCAT
GGCGTCACCA GCGCCCTGAC TTTCTTCAAC CCGTTCGTTC TTATCGCCCT ATTCGCCGCC
CTGGCGCATT TCATCCAGCG CAAGTGGGCA CTGACCGCAT TTGTCGCCCT GTCGTTCCTG
CTGATCCTCA ACCTGGGTTA CTGGCAGGAA ACCATGGAGA CCCTGGCGCA GGTCACCTTC
GCCACGGTGG TATGTGTGGT GATCGGCGTG CCACTGGGCA TCCTCGCCGC GCACAAGCCG
ATGTTCTATA CCGCCATGCG CCCGGTGCTC GACCTGATGC AGACGGTGCC CACCTTCGTC
TACCTGATCC CTACCCTGAC CCTGTTCGGC CTGGGCGTGG TGCCGGGGCT GATCTCCACC
GTGGTGTTCG CCATTGCTGC GCCCATTCGC CTGACCTACC TGGGCATCTG CGACGTGCCG
CAAGAGTTGA TGGACGCCGG CAAGGCCTTT GGCTGCTCGC GTCGTCAGCT GCTTACCCGT
ATCGAACTGC CGCACGCGAT GCCAAGCATC GCCGCCGGTG TCACTCAATG CATCATGCTG
TCGCTGTCGA TGGTGGTCAT TGCCGCCCTG GTTGGCGCTG ATGGCCTGGG CAAACCTGTG
GTCAACGCAC TGAACACCGC CGATATCTCC CTGGGCTTCG AAGCGGGCCT GGCGATCGTG
CTGCTGGCAA TCATGCTCGA CCGTATCTGC AAGCAACCGG AACTGCCGGT AAGGGGTGAG
GCATGA
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| Protein sequence | MLIDQKIPLG QYIASFVEWL TQNGANYFDA IAQGLEFMIH GVTSALTFFN PFVLIALFAA
LAHFIQRKWA LTAFVALSFL LILNLGYWQE TMETLAQVTF ATVVCVVIGV PLGILAAHKP
MFYTAMRPVL DLMQTVPTFV YLIPTLTLFG LGVVPGLIST VVFAIAAPIR LTYLGICDVP
QELMDAGKAF GCSRRQLLTR IELPHAMPSI AAGVTQCIML SLSMVVIAAL VGADGLGKPV
VNALNTADIS LGFEAGLAIV LLAIMLDRIC KQPELPVRGE A
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