Gene PP_0290 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPP_0290 
SymbolhisH 
ID1043975 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida KT2440 
KingdomBacteria 
Replicon accessionNC_002947 
Strand
Start bp350586 
End bp351224 
Gene Length639 bp 
Protein Length212 aa 
Translation table11 
GC content63% 
IMG OID637143669 
Productimidazole glycerol phosphate synthase subunit HisH 
Protein accessionNP_742457 
Protein GI26987032 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0118] Glutamine amidotransferase 
TIGRFAM ID[TIGR01855] imidazole glycerol phosphate synthase, glutamine amidotransferase subunit 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000177427 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCAAACGG TAGCCGTAAT CGACTATGGC ATGGGTAACC TGCACTCGGT GGCCAAGGCG 
CTTGAGCACG TAGGTGCCGG TAAAGTGCTG GTTACCAGCG ATGCCTCAGT GATCCGCGAG
GCCGACCGTG TGGTGTTCCC GGGCGTGGGC GCGATTCGCG ACTGCATGGC CGAGATCCGC
CGCCTGGGCT TCGACAGCCT GGTGCGCGAA GTCAGCCAGG ACCGCCCGTT CCTCGGCATC
TGCGTCGGTA TGCAGGCGCT GCTCGAGCAC AGTGAGGAAA ACGCCGGCGT CGACTGCATT
GGCCTGTTCC CTGGCCAGGT GCGCTTTTTC GGCAAAGACC TGCAAGAAGA GGGCGAGCAC
CTGAAGGTGC CGCACATGGG CTGGAACGAA GTCAGCCAGA CCATCGACCA CCCGCTGTGG
CACGACATCC CTGATCGCGC ACGTTTCTAC TTCGTGCACA GCTACTACAT CAATGCCGGC
AAGCCGGGCC AGGTGGTGGG TCGCGGTCAC TATGGCGTCG ATTTCGCCGC AGCGCTGGCC
GACGGTTCGC GTTTTGCCGT GCAGTTCCAC CCGGAGAAGA GCCATACCCA TGGCCTGCAG
CTGCTGCAGA ACTTCATCGC CTGGGACGGG CGCTGGTAA
 
Protein sequence
MQTVAVIDYG MGNLHSVAKA LEHVGAGKVL VTSDASVIRE ADRVVFPGVG AIRDCMAEIR 
RLGFDSLVRE VSQDRPFLGI CVGMQALLEH SEENAGVDCI GLFPGQVRFF GKDLQEEGEH
LKVPHMGWNE VSQTIDHPLW HDIPDRARFY FVHSYYINAG KPGQVVGRGH YGVDFAAALA
DGSRFAVQFH PEKSHTHGLQ LLQNFIAWDG RW