| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_0282 |
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| Symbol | |
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| ID | 1043897 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida KT2440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002947 |
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| Strand | - |
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| Start bp | 339313 |
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| End bp | 340065 |
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| Gene Length | 753 bp |
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| Protein Length | 250 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 637143660 |
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| Product | amino acid ABC transporter, periplasmic amino acid-binding protein |
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| Protein accession | NP_742449 |
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| Protein GI | 26987024 |
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| COG category | [E] Amino acid transport and metabolism
[T] Signal transduction mechanisms |
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| COG ID | [COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
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| TIGRFAM ID | [TIGR01096] lysine-arginine-ornithine-binding periplasmic protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.0338349 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 3 |
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| Fosmid unclonability p-value | 0.000164452 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCACACCT ACAAGAAGTT TCTCCTGGCA GCTGCTGCCA CGCTGGTGAT GTCGGCAAAC
GCCATGGCCG CAGAAAAACT GCGCATGGGC ATCGAAGCCG CCTACCCACC GTTCAACAAC
AAGGATGCCA GCGGTAACGT GGTTGGCTTC GACAAAGACA TTGGCGACGC CCTGTGCGCC
AAGATGAAAG TCGAATGCTC GGTCGTTACC TCCGACTGGG ACGGCATCAT CCCGGCCCTG
AATGCCAAGA AGTTCGACTT CCTGGTGTCG TCGCTGTCGA TCACCGACGA GCGCAAGCAG
GCTGTGGACT TCACCAATCC GTACTACTCC AACAAACTGC AGTTCATCGC GCCGAAAAAC
GTCGACTTCA AGACTGACAA AGAGTCGCTG AAAGGTAAGG TCATCGGCAC CCAGCGCGCC
ACCCTGGCCG GCACCTACCT TGAAGACAAC TACCCGGATG TCGAGATCAA ACTCTACGAC
ACCCAAGAAA ACGCCTACCT TGACCTGGTT TCCGGTCGTA TCGACGGCAT CCTGGCCGAC
AAATACGTGC AGTACGAGTG GCTGAAAAGC AAAGACGGCT CGAACTTCGA GTTCAAGGGC
GAGCCGGTGA TGGACAGCGA CAAGATCGGC ATTGCCGTGC GCAAAGGTGA CACCAAGCTG
CGCGACGACC TGAACAAAGC CCTGGCAGAA ATCAAAGCCG ACGGTACGTA CAAGAAAATC
AACGACAAGT ACTTCCCGTT CAGCATCGAA TGA
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| Protein sequence | MHTYKKFLLA AAATLVMSAN AMAAEKLRMG IEAAYPPFNN KDASGNVVGF DKDIGDALCA
KMKVECSVVT SDWDGIIPAL NAKKFDFLVS SLSITDERKQ AVDFTNPYYS NKLQFIAPKN
VDFKTDKESL KGKVIGTQRA TLAGTYLEDN YPDVEIKLYD TQENAYLDLV SGRIDGILAD
KYVQYEWLKS KDGSNFEFKG EPVMDSDKIG IAVRKGDTKL RDDLNKALAE IKADGTYKKI
NDKYFPFSIE
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