| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_0272 |
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| Symbol | |
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| ID | 1043868 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida KT2440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002947 |
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| Strand | + |
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| Start bp | 330109 |
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| End bp | 332406 |
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| Gene Length | 2298 bp |
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| Protein Length | 765 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637143649 |
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| Product | TonB-dependent siderophore receptor |
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| Protein accession | NP_742439 |
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| Protein GI | 26987014 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG4773] Outer membrane receptor for ferric coprogen and ferric-rhodotorulic acid |
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| TIGRFAM ID | [TIGR01783] TonB-dependent siderophore receptor |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 3 |
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| Fosmid unclonability p-value | 0.000199499 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAATCCCC AAAGCATCAC GCCAGTGTTC ATCCCCTTCA GTCAAAGTGG CAATTGCCTC
AAGCCGCTGG CCTTCTGCAT TGCCGTCGCC ATCAGCGGTG GTGCAGTGGC TGCCGACGGC
AAACCCCTTG AACTCGACGC CACACAGATC GAAGACAGCG CAGTACTGCC TGCCGACGAT
GCCGGCCAGT TGGGCTATAC GGTCGAGAGC ACCCGCAGCT CCACTGGCCT GGCACTGACG
CCACGGCAGA CACCGCAATC GGTTACCACC ATCACCCGCC AGCAGATGGA TGACCGCGAC
ATCCACACCA TCGAGCAGGC ATTGGAAACC GCCCCAGGCG TAACGGCCAA CAAGTCCGAG
GTGGGTGGGC GCACCGACTA CCGCGCGCGT GGTTACTCGA TCAGCAACTG GAAGGTCGAT
GGCCTGCAGA CCCAGGGCGG CTCCGATTTC AGTGGCAGCG GCAATGCGCT GAACATGGAC
CTGTACGAAC GCATCGACAT CGTGCGCGGC GCCAACGGCC TGCTGGGCGG CACCGGCGAC
CCCTCGGCCA CCGTCAACCT GATCCGCAAG GCACCGACCA AAACCTTCGG CGGCAGCGCT
TATGCCACTT ATGGCAGCTG GGACAAGCGT CGTCTGGGTG CTGACTTGAA CCTGCCGCTG
TCCGAAGATG GCCGCCTGCG TTCGCGCTTC GTGATGACCC AGCAGGATGC CAACTCGTTC
CGCGACAACC AGTCCGAACG TTCCCGCGCC GCGTTGGCCA ATTTCGAGTT CGACCTGGAC
GACGCCACCA CCCTCGGCGC CGGTTACCAG TATGAGTACA ACAAGGTCGT GGGTGGCGGC
TGGGGCGCGA ACATCCCGAT CTGGTACCGC GACGGCAGCA AGACCGACTT GCCGCGCAGC
ACCAACCTGG TGCCCAGCTG GAGCTTTGGC GAGTACACCA CCCGCACTGC GTTCGGTTCG
CTCGAGCATC GCTTCGACAA CGACTGGACC CTGGACCTGA AAGCCGCCCA GGCCACCACC
GAAGCCCTGA ACCATCGCGG CCTTGCCAAG GTGAATTCGG CCGGGCGCGG CAGCTACGGC
GGCTATTGGG ACCAGGACGG CAGCGGCGCA GTACTGAATG GTTTGCACAG CTCCAGCGAC
ACCACCCAGC AGTCGGCGCA GATCGACCTG TCTGGCCCGT TCCAGCTGTT TGGCCGCACC
CACCAGGCGA TGGTCGGCTA CAACGACAGC CGCACCGTCG GCTGGTCGCC CCAGTACACC
TGCACCATGG TCGGCGACGG CATGACCAGC GCGCCTGCAC TGGGTTGCCA GTTCCGCGCC
AACAACGGCT TCCCGGTGAC CGACTGGCAC AATGGCGTGG ATGACGACTA CGACCTCATC
GCCTCGCGCA CCGGCCTTCA CAGCAAGACC ACCACCCGTC TGCAGGGCAT GTACGCCGCC
ACCCGCCTGA GCATCACCGA CCCGTTGTCG GTGATCGTTG GCGTGCGCAC CAGCAACTAT
TCCTCGGTCA CCCGCAGCGT GGCCGGCGAG CGCAGCAGCC AGGAAGAAAA CGGCATCGTC
ACCCCTTACC TGGGCGCGGT GTATGACCTC AATGTCAACT ACTCGGTATA CGCCAGCTAC
ACCGATATCT TCACGCCGCA AACGTCTGAA ACCAGCAGCG GCAGCAAGGT CGAGCCGATT
CGTGGGCAAA GCTACGAGAC AGGTATCAAG GGTGAGTGGT TCGATGGCCG CCTGAACGCC
TCGGCGGCGT ACTTCCGCAC CAAGCAGGAA AACAAGGCCG TGTTGGACGG CGACCTGACC
ACCCCGACTG GCGGCAGCGC CTACAAGGCC GGCTCCGGGC AGGAAACCGA TGGTATCGAC
TTGGAAGTCG CAGGCGCCCT GACCCCCAAC TGGAACGTCT ACGCCGGTTA CACCTACCTG
CACTTTCGCC GCGTCGACAG CGACGGCCGC AGCGACCCGT CGCACTTGTT CAAGGCCTCC
ACCACCTACC GCCTGAGCGG CCCGCTCGAC CGCCTGACCC TGGGCGCCGG CGTGACTGCG
CAGACCAACA TCCGCGCCAT CTCCAGCCCT GCTGGCCAGC CTACTAACGG TGTGAGCAAT
GGTGCCACTG ACGTGAACTG GTCCGGTTAT GCCATCTGGA ATGCCATGGC CAAGTACCAG
CTGACCGACG ACACCAGCGT CAGCCTCCAC GCCAACAACC TGTTCGACAA GCACTACTAC
AGCCAGTACG GGTTCTATGC CGGGGCGATT TATGGCGACC CGCGTAACCT GTCGTTGACG
GTAAGCACCG CGTTCTGA
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| Protein sequence | MNPQSITPVF IPFSQSGNCL KPLAFCIAVA ISGGAVAADG KPLELDATQI EDSAVLPADD
AGQLGYTVES TRSSTGLALT PRQTPQSVTT ITRQQMDDRD IHTIEQALET APGVTANKSE
VGGRTDYRAR GYSISNWKVD GLQTQGGSDF SGSGNALNMD LYERIDIVRG ANGLLGGTGD
PSATVNLIRK APTKTFGGSA YATYGSWDKR RLGADLNLPL SEDGRLRSRF VMTQQDANSF
RDNQSERSRA ALANFEFDLD DATTLGAGYQ YEYNKVVGGG WGANIPIWYR DGSKTDLPRS
TNLVPSWSFG EYTTRTAFGS LEHRFDNDWT LDLKAAQATT EALNHRGLAK VNSAGRGSYG
GYWDQDGSGA VLNGLHSSSD TTQQSAQIDL SGPFQLFGRT HQAMVGYNDS RTVGWSPQYT
CTMVGDGMTS APALGCQFRA NNGFPVTDWH NGVDDDYDLI ASRTGLHSKT TTRLQGMYAA
TRLSITDPLS VIVGVRTSNY SSVTRSVAGE RSSQEENGIV TPYLGAVYDL NVNYSVYASY
TDIFTPQTSE TSSGSKVEPI RGQSYETGIK GEWFDGRLNA SAAYFRTKQE NKAVLDGDLT
TPTGGSAYKA GSGQETDGID LEVAGALTPN WNVYAGYTYL HFRRVDSDGR SDPSHLFKAS
TTYRLSGPLD RLTLGAGVTA QTNIRAISSP AGQPTNGVSN GATDVNWSGY AIWNAMAKYQ
LTDDTSVSLH ANNLFDKHYY SQYGFYAGAI YGDPRNLSLT VSTAF
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