Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PP_0270 |
Symbol | |
ID | 1043866 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida KT2440 |
Kingdom | Bacteria |
Replicon accession | NC_002947 |
Strand | - |
Start bp | 327880 |
End bp | 329247 |
Gene Length | 1368 bp |
Protein Length | 455 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 637143647 |
Product | integral membrane sensor signal transduction histidine kinase |
Protein accession | NP_742437 |
Protein GI | 26987012 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0642] Signal transduction histidine kinase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 5 |
Fosmid unclonability p-value | 0.00239183 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGCGCTGGT GTCACCGGCT ATGGCCCCGC ACCTTGTTTG GTCAACTGCT GCTGATCATG GTCAGTGGCA CGCTGGTGAT CCAGTTGATG TCGAGCAGCA TCTGGTTCGA CGTGCGTTTC GCTCAGGCGC TAGAGGTGCC CGTACGACTG GTTGCTGCAC GCAGCGCCCC CCTGATTGCC CAGGCCGACT GCCACGGCGG TACGCTGCAG GCGCCAGCCC ACTACCAGCT TCACTGCGTC GAAAGCCCGC CTGCGCAAGA GCATGACGAG CGCCGCGGGC ACAGGCGGGT CGAGCTGTTG TTGCAGCAGG CCCTGAAGTA CGAGCTGGGG CATGCCCAGG ACGTACGCCT GATGCACGTG CAACTCACCG ACGAGCTGGG CCAGCCGATC GTCTGGCGCA GCCTGTTCGG CCTGCGCACG GCCCAGGCGC ATATCCAGTT CGCGGTGCCG CTGGCCGATG GCCACTGGCT GACCGTTGCG GGCCAGGAAC TGCAGGGCTG GAGCGGCGAG TCGGCCTGGG TGCTGATCAG CGATTACCTG CTGCGGGTGT ATGCGCTGCG CATCGTCGCG GTGTTGCTGG TGTGCCTGGT TGCCGTGCGC CTGTGCCTGC GCCCGTTGCG GCGCCTGGCC GATGCCGCAC GCGGCCTGGG CAGCAACCTC GAGCAGCCTC CCCTGGCGCT GGATGGCCCG GAGGAAGTGC GCCAGGCGGC GCAGGCGTTC AACGCGATGC AGCAGCGGCT GATTGCCATG GTCAACGACA AGGCCTACTT CCTGGCCGCC GTGTCTCATG ACCTGCGCAC CCCACTGACC CGCATGCGCC TGCGACTGGA GCGCTTACCC GATGACGAAC ACCGCCAGCG CCTGCAGCAG AACATCACGC AGATGGACAA TATGATCGGT CAGGTTCTGG ATTACCTGCG TGCCGGAGAG CAGCAGAACT TGCAGCAGGT GGACCTGGAC CGGCTGGTGA CGCGCCAGTG TGCGGACCTG GCGACTGACC AGGAACCACT GCCGGTGCAC GGCCGGGTGA ACAGCCTGCG GGGGGATGCC CTGCTGCTGC AGCGCTGCCT GCAGAACTTG TTGGTCAATG CGTTGCGTTA TGCCAAGGAT GTTTCTGTCA CGCTGGAGCG GACCACCACA GGAGTGTTCA TCCACATCGA CGACCGTGGA CCAGGCATTT CGCCAGCGCT GCTGCCGACC ATCACCGACC CGTTCGTGCG CGGTGAGGGA TCGCGTAACC AGGCATCCGG CGGATATGGG CTGGGGCTGA GCATTGCCCA GCGGATCGCC GCCAGCCATG GGGGTGAGCT GATATTGTCG AACCGTGAGA GCGGTGGATT GCGGGTCAGC ATACTGCTGC CTGGCTAA
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Protein sequence | MRWCHRLWPR TLFGQLLLIM VSGTLVIQLM SSSIWFDVRF AQALEVPVRL VAARSAPLIA QADCHGGTLQ APAHYQLHCV ESPPAQEHDE RRGHRRVELL LQQALKYELG HAQDVRLMHV QLTDELGQPI VWRSLFGLRT AQAHIQFAVP LADGHWLTVA GQELQGWSGE SAWVLISDYL LRVYALRIVA VLLVCLVAVR LCLRPLRRLA DAARGLGSNL EQPPLALDGP EEVRQAAQAF NAMQQRLIAM VNDKAYFLAA VSHDLRTPLT RMRLRLERLP DDEHRQRLQQ NITQMDNMIG QVLDYLRAGE QQNLQQVDLD RLVTRQCADL ATDQEPLPVH GRVNSLRGDA LLLQRCLQNL LVNALRYAKD VSVTLERTTT GVFIHIDDRG PGISPALLPT ITDPFVRGEG SRNQASGGYG LGLSIAQRIA ASHGGELILS NRESGGLRVS ILLPG
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