Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PP_0265 |
Symbol | |
ID | 1043858 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida KT2440 |
Kingdom | Bacteria |
Replicon accession | NC_002947 |
Strand | - |
Start bp | 319782 |
End bp | 320327 |
Gene Length | 546 bp |
Protein Length | 181 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 637143642 |
Product | dTDP-4-dehydrorhamnose 3,5-epimerase |
Protein accession | NP_742432 |
Protein GI | 26987007 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1898] dTDP-4-dehydrorhamnose 3,5-epimerase and related enzymes |
TIGRFAM ID | [TIGR01221] dTDP-4-dehydrorhamnose 3,5-epimerase |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.0150738 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACATCA TCCCTACAGC AATCCCTGAA GTACTGATCA TCGAGCCGAA GGTGTTCGCT GACAGCCGTG GTTTTTTCTT CGAGGCATTC AACGCCCGTG AGTTCTCAGA GCAAACCGGC GTGAACGTGA CGTTCGTCCA GGACAACCAC TCGCGCTCCA TCAAGGGCGT GCTCCGTGGG CTGCACTACC AGGTGGCAAA CACCCAGGGC AAGCTGGTGC GCGTGGTGCA CGGGGAAATC CGCGATATCG CCGTGGACGT GCGCAAAAGC TCGCCAACAT TCGGTAAATG GGTCGCGGTG CACCTGTCAG CCGACAACCA TCGCCAGCTG TGGATTCCGC CTGGCTTCGC CCACGGTTTT GCGGTGATGA GTGAATCGGC AGAGTTCCTC TACAAGACCA CCGACTACTA CAACCCTGGC GCCGACCGCT GTATCCGCTG GGACGACCCG CAACTGGCCA TCGACTGGGG GCTGCAGCAG CCACCGCTGT TATCGGACAA GGACAAGGTG GGCCTGCCAT TGGCAGAGGC GGAAGTGCTG CCTTAA
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Protein sequence | MNIIPTAIPE VLIIEPKVFA DSRGFFFEAF NAREFSEQTG VNVTFVQDNH SRSIKGVLRG LHYQVANTQG KLVRVVHGEI RDIAVDVRKS SPTFGKWVAV HLSADNHRQL WIPPGFAHGF AVMSESAEFL YKTTDYYNPG ADRCIRWDDP QLAIDWGLQQ PPLLSDKDKV GLPLAEAEVL P
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