| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_0265 |
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| Symbol | |
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| ID | 1043858 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida KT2440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002947 |
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| Strand | - |
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| Start bp | 319782 |
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| End bp | 320327 |
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| Gene Length | 546 bp |
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| Protein Length | 181 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637143642 |
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| Product | dTDP-4-dehydrorhamnose 3,5-epimerase |
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| Protein accession | NP_742432 |
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| Protein GI | 26987007 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1898] dTDP-4-dehydrorhamnose 3,5-epimerase and related enzymes |
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| TIGRFAM ID | [TIGR01221] dTDP-4-dehydrorhamnose 3,5-epimerase |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.0150738 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAACATCA TCCCTACAGC AATCCCTGAA GTACTGATCA TCGAGCCGAA GGTGTTCGCT
GACAGCCGTG GTTTTTTCTT CGAGGCATTC AACGCCCGTG AGTTCTCAGA GCAAACCGGC
GTGAACGTGA CGTTCGTCCA GGACAACCAC TCGCGCTCCA TCAAGGGCGT GCTCCGTGGG
CTGCACTACC AGGTGGCAAA CACCCAGGGC AAGCTGGTGC GCGTGGTGCA CGGGGAAATC
CGCGATATCG CCGTGGACGT GCGCAAAAGC TCGCCAACAT TCGGTAAATG GGTCGCGGTG
CACCTGTCAG CCGACAACCA TCGCCAGCTG TGGATTCCGC CTGGCTTCGC CCACGGTTTT
GCGGTGATGA GTGAATCGGC AGAGTTCCTC TACAAGACCA CCGACTACTA CAACCCTGGC
GCCGACCGCT GTATCCGCTG GGACGACCCG CAACTGGCCA TCGACTGGGG GCTGCAGCAG
CCACCGCTGT TATCGGACAA GGACAAGGTG GGCCTGCCAT TGGCAGAGGC GGAAGTGCTG
CCTTAA
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| Protein sequence | MNIIPTAIPE VLIIEPKVFA DSRGFFFEAF NAREFSEQTG VNVTFVQDNH SRSIKGVLRG
LHYQVANTQG KLVRVVHGEI RDIAVDVRKS SPTFGKWVAV HLSADNHRQL WIPPGFAHGF
AVMSESAEFL YKTTDYYNPG ADRCIRWDDP QLAIDWGLQQ PPLLSDKDKV GLPLAEAEVL
P
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