Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PP_0263 |
Symbol | |
ID | 1043849 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida KT2440 |
Kingdom | Bacteria |
Replicon accession | NC_002947 |
Strand | - |
Start bp | 316522 |
End bp | 317928 |
Gene Length | 1407 bp |
Protein Length | 468 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 637143640 |
Product | two component, sigma54 specific, transcriptional regulator, Fis family |
Protein accession | NP_742430 |
Protein GI | 26987005 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.513605 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.0177919 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCACCG AGACACTGAT CGACAGCCGA GCCCAGGTCA TCCTGGTGGA CGATGACCCC CACCTGCGCC AAGCCTTGAG CCAGACCCTG GACCTGGCCG GGCTCAAGGT AGTCGCGCTG GCCGAAGCCC AAGGCCTGGC CGAGCGTATC GAGGCCGACT GGCCCGGCGT GGTGGTCAGC GACATTCGCA TGCCGGGCAT CGATGGCCTG CAGTTGCTGG AACAACTGCA CGGCCGCGAC AGCGAACTGC CGGTGCTGCT GATTACCGGC CATGGCGATG TGCCGCTGGC GGTGCAGGCG ATGCGCGCCG GGGCTTATGA CTTCCTGGAA AAACCCTTTG CCACAGACGC CCTGCTCGAC AGCGTGCGCC GCGCCCTGGC TTTGCGCCGG CTGGTGCTGG ACAACCGTAG CCTGCGTCTG GCACTGAGCG ACCGCCAGCA ACTGGCAACC CGCCTGGTCG GCCATTCACC GGCCATGCTG CGCCTGCGCG AGCAGATCGG CGCTTTGGCC GGCACCCGCG CCGACGTGTT GATTCTGGGC GAAACCGGCG CCGGCAAAGA GGTGGTGGCC CGCGCGCTGC ACGACCTGTC CAGCCGCAGC GAAGGGCCGT TCGTGGCGAT CAACGCCGGC GCGCTGGCCG AATCGGTGGT CGAAAGCGAA CTGTTCGGCC ACGAGCCCGG TGCGTTCACC GGCGCGCAGA AACGCCGTAT CGGCAAGTTC GAATTTGCCA ACGGCGGCAC GCTGTTCCTC GACGAAATCG AGAGCATGAG CCTGGATGTA CAGGTGAAGT TGCTGCGCAT GCTGCAGGAG CGAGTGGTCG AACGCCTGGG CGGCAACCAG TTGATCCCGC TGGACATCCG CATCATAGCC GCGACCAAGG AAGACCTGCG TCAGTCTGCC GACCAAGGGC GTTTCCGCGC AGACCTGTAT TACCGCCTGA ACGTGGCGCC GCTGCGTATT CCGCCACTGC GTGAACGCGG CGACGACATA TTGGTGTTGT TCCAGCATTT CGCCGATGCT GCCAGCCAAC GTCATGGCCT GTCGCCGCAT GCGCTGCAAC CCGCGCAACG CGCCCTGCTG CTGCGTCATG ACTGGCCAGG CAACGTCCGC GAGCTACAGA ACGCCGCCGA GCGTTTCGCC CTTGGCCTGG AGCTGGCACT GGATGGCCAG GCACCCTCGG CAGCAGCCCC GGCAGCGCCC ATGCTCAGCG GCAACCTCAG CGAACAGGTC GAGCAATTCG AACGTTCGCT GATCGCCGCC GAACTGGCCC AGCCACACGG CTCCATGCGG AGCCTGGCCG AAGCACTGGG TATCCCCCGC AAAACCTTGC ACGACAAGCT GCGCAAGCAT GGCTTGAACT TCGACGGCGG CAGCGGCGGG CATGACGATC AAGAGGACAA CCGTTAA
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Protein sequence | MTTETLIDSR AQVILVDDDP HLRQALSQTL DLAGLKVVAL AEAQGLAERI EADWPGVVVS DIRMPGIDGL QLLEQLHGRD SELPVLLITG HGDVPLAVQA MRAGAYDFLE KPFATDALLD SVRRALALRR LVLDNRSLRL ALSDRQQLAT RLVGHSPAML RLREQIGALA GTRADVLILG ETGAGKEVVA RALHDLSSRS EGPFVAINAG ALAESVVESE LFGHEPGAFT GAQKRRIGKF EFANGGTLFL DEIESMSLDV QVKLLRMLQE RVVERLGGNQ LIPLDIRIIA ATKEDLRQSA DQGRFRADLY YRLNVAPLRI PPLRERGDDI LVLFQHFADA ASQRHGLSPH ALQPAQRALL LRHDWPGNVR ELQNAAERFA LGLELALDGQ APSAAAPAAP MLSGNLSEQV EQFERSLIAA ELAQPHGSMR SLAEALGIPR KTLHDKLRKH GLNFDGGSGG HDDQEDNR
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