Gene PP_0263 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPP_0263 
Symbol 
ID1043849 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida KT2440 
KingdomBacteria 
Replicon accessionNC_002947 
Strand
Start bp316522 
End bp317928 
Gene Length1407 bp 
Protein Length468 aa 
Translation table11 
GC content66% 
IMG OID637143640 
Producttwo component, sigma54 specific, transcriptional regulator, Fis family 
Protein accessionNP_742430 
Protein GI26987005 
COG category[T] Signal transduction mechanisms 
COG ID[COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.513605 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0177919 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCACCG AGACACTGAT CGACAGCCGA GCCCAGGTCA TCCTGGTGGA CGATGACCCC 
CACCTGCGCC AAGCCTTGAG CCAGACCCTG GACCTGGCCG GGCTCAAGGT AGTCGCGCTG
GCCGAAGCCC AAGGCCTGGC CGAGCGTATC GAGGCCGACT GGCCCGGCGT GGTGGTCAGC
GACATTCGCA TGCCGGGCAT CGATGGCCTG CAGTTGCTGG AACAACTGCA CGGCCGCGAC
AGCGAACTGC CGGTGCTGCT GATTACCGGC CATGGCGATG TGCCGCTGGC GGTGCAGGCG
ATGCGCGCCG GGGCTTATGA CTTCCTGGAA AAACCCTTTG CCACAGACGC CCTGCTCGAC
AGCGTGCGCC GCGCCCTGGC TTTGCGCCGG CTGGTGCTGG ACAACCGTAG CCTGCGTCTG
GCACTGAGCG ACCGCCAGCA ACTGGCAACC CGCCTGGTCG GCCATTCACC GGCCATGCTG
CGCCTGCGCG AGCAGATCGG CGCTTTGGCC GGCACCCGCG CCGACGTGTT GATTCTGGGC
GAAACCGGCG CCGGCAAAGA GGTGGTGGCC CGCGCGCTGC ACGACCTGTC CAGCCGCAGC
GAAGGGCCGT TCGTGGCGAT CAACGCCGGC GCGCTGGCCG AATCGGTGGT CGAAAGCGAA
CTGTTCGGCC ACGAGCCCGG TGCGTTCACC GGCGCGCAGA AACGCCGTAT CGGCAAGTTC
GAATTTGCCA ACGGCGGCAC GCTGTTCCTC GACGAAATCG AGAGCATGAG CCTGGATGTA
CAGGTGAAGT TGCTGCGCAT GCTGCAGGAG CGAGTGGTCG AACGCCTGGG CGGCAACCAG
TTGATCCCGC TGGACATCCG CATCATAGCC GCGACCAAGG AAGACCTGCG TCAGTCTGCC
GACCAAGGGC GTTTCCGCGC AGACCTGTAT TACCGCCTGA ACGTGGCGCC GCTGCGTATT
CCGCCACTGC GTGAACGCGG CGACGACATA TTGGTGTTGT TCCAGCATTT CGCCGATGCT
GCCAGCCAAC GTCATGGCCT GTCGCCGCAT GCGCTGCAAC CCGCGCAACG CGCCCTGCTG
CTGCGTCATG ACTGGCCAGG CAACGTCCGC GAGCTACAGA ACGCCGCCGA GCGTTTCGCC
CTTGGCCTGG AGCTGGCACT GGATGGCCAG GCACCCTCGG CAGCAGCCCC GGCAGCGCCC
ATGCTCAGCG GCAACCTCAG CGAACAGGTC GAGCAATTCG AACGTTCGCT GATCGCCGCC
GAACTGGCCC AGCCACACGG CTCCATGCGG AGCCTGGCCG AAGCACTGGG TATCCCCCGC
AAAACCTTGC ACGACAAGCT GCGCAAGCAT GGCTTGAACT TCGACGGCGG CAGCGGCGGG
CATGACGATC AAGAGGACAA CCGTTAA
 
Protein sequence
MTTETLIDSR AQVILVDDDP HLRQALSQTL DLAGLKVVAL AEAQGLAERI EADWPGVVVS 
DIRMPGIDGL QLLEQLHGRD SELPVLLITG HGDVPLAVQA MRAGAYDFLE KPFATDALLD
SVRRALALRR LVLDNRSLRL ALSDRQQLAT RLVGHSPAML RLREQIGALA GTRADVLILG
ETGAGKEVVA RALHDLSSRS EGPFVAINAG ALAESVVESE LFGHEPGAFT GAQKRRIGKF
EFANGGTLFL DEIESMSLDV QVKLLRMLQE RVVERLGGNQ LIPLDIRIIA ATKEDLRQSA
DQGRFRADLY YRLNVAPLRI PPLRERGDDI LVLFQHFADA ASQRHGLSPH ALQPAQRALL
LRHDWPGNVR ELQNAAERFA LGLELALDGQ APSAAAPAAP MLSGNLSEQV EQFERSLIAA
ELAQPHGSMR SLAEALGIPR KTLHDKLRKH GLNFDGGSGG HDDQEDNR