| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_0259 |
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| Symbol | |
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| ID | 1043842 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida KT2440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002947 |
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| Strand | - |
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| Start bp | 313876 |
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| End bp | 314538 |
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| Gene Length | 663 bp |
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| Protein Length | 220 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637143636 |
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| Product | HAD superfamily hydrolase |
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| Protein accession | NP_742426 |
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| Protein GI | 26987001 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1011] Predicted hydrolase (HAD superfamily) |
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| TIGRFAM ID | [TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.014081 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCTGTTC TTCCCTGGTC TGCCATCGAT ACCGTCCTGC TGGATATGGA TGGCACCCTG
CTCGACCTGC ATTACGACAA CCGCTTCTGG CTGGACCACC TGCCCCAGCG CTATGCCGAG
CTGCACGGTG TAAGCCGGGC CATGGCCGAA ATGGAGCTGC AACCGCTGTT CGAACGCAAT
GCCGGCACAT TGAACTGGTA CTGCCTGGAC TTCTGGAGCC GCGAGCTACG CCTGCCCATT
CGCGAGCTGA AGCGGGAAAT TGCCGACCTG ATTGCCCTGC GCCCGGATGC CGATACCTTC
CTGGCGGCGA TTCGCCAGGC TGGCAAGCGT GTCGTGATGA TCACCAATGC CCACCGTGAC
TCGCTGTCTC TGAAGCTGGA GCGGGTGGAG CTGGCACCAT ACTTCGAGCG GCTGATCAGC
TCGCACGACT ATGGCTACGC GAAGGAAAGC CCGCAGTTTT GGGATGCCCT GCAGGCGGAT
ATCGGCTTCG AACCGGAACG CAGCCTGTTC ATCGATGACA CGCTGGCGAT TCTGCGCAGT
GCACGGCGGT TTGGTGTGGG GCACTTGCTG GCGGTGCGCC AGCCGGATAG CAAAGCAGGG
CCGCGGGATA CTGAAGAGTT TGCGGCGGTC GAGGATTACC GGGAGTTACT GGTAGGCCTG
TAA
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| Protein sequence | MPVLPWSAID TVLLDMDGTL LDLHYDNRFW LDHLPQRYAE LHGVSRAMAE MELQPLFERN
AGTLNWYCLD FWSRELRLPI RELKREIADL IALRPDADTF LAAIRQAGKR VVMITNAHRD
SLSLKLERVE LAPYFERLIS SHDYGYAKES PQFWDALQAD IGFEPERSLF IDDTLAILRS
ARRFGVGHLL AVRQPDSKAG PRDTEEFAAV EDYRELLVGL
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