Gene PP_0256 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPP_0256 
Symbol 
ID1043835 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida KT2440 
KingdomBacteria 
Replicon accessionNC_002947 
Strand
Start bp310028 
End bp312373 
Gene Length2346 bp 
Protein Length781 aa 
Translation table11 
GC content64% 
IMG OID637143633 
Productmolybdopterin oxidoreductase, alpha subunit 
Protein accessionNP_742423 
Protein GI26986998 
COG category[C] Energy production and conversion 
COG ID[COG0243] Anaerobic dehydrogenases, typically selenocysteine-containing 
TIGRFAM ID[TIGR01701] oxidoreductase alpha (molybdopterin) subunit 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0525397 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0252324 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACCTCGT ACCAACAACT TCCGGACAAC ACCCCAGCCT CCCCCCCTCG CTACAAGCCC 
TACCACGGCC CCGCCGGCGG TTGGGGCGCA CTGCGTAGCG TGGCCAAGGC CTGGGTCGGC
AGCGATAATG CGCTGAAGAA CATTCGCGCC CTGCTCAAGA CCAACCAGAA CGGCGGTTTC
GACTGCCCCG GCTGCGCCTG GGGGGACTCC CCGGAAAGCG GCATGGTCAA GTTCTGCGAG
AACGGCGCCA AGGCGGTGAA CTGGGAAGCT ACCAAGCGCC GTGTCGATGC AGCCTTCTTC
GCCCGTTACA GCGTCACCTC GCTGCTGCAG CAGAGCGACT ACTGGCTGGA GTACCAAGGG
CGCCTGACCG AACCGATGGT CTACGACGCA CCCAGCGACC GTTACCTGCC GATCAGCTGG
GATGCCGCCT TCGCCCTGAT CGCCCGCGAA CTGAACAAGC TGGCCAACCC TGACCAGGCC
GAATTCTATA CCTCGGGACG TGCCAGCAAC GAAGCGGCGT ACCTGTACCA ACTGTTCGTG
CGCGCCTACG GCACCAACAA CTTCCCTGAC TGCTCGAACA TGTGCCATGA GGCCAGCGGC
GTGGCGTTGG GGCAAAGCGT CGGGGTCGGC AAAGGTACAG TCACCTTCGA CGACTTCGAG
CACGCCGACG CCATTTTTGT CTGGGGCCAG AACCCCGGCA CCAATCACCC GCGCATGCTC
GACCCACTGC GTGATGCGGT AAAGCGTGGC GCCCAGGTGG TGTGCATCAA CCCGCTCAAG
GAGCGTGGTC TGGAGCGCTT CCAGCACCCC CAGAACCCAC TGGAAATGCT GACCAACAGT
GACCGCCCGA CCAACACCGC CTTCTTCCGC CCGGCCCTGG GTGGCGACAT GGCGATGCTG
CGCGGCATGG CCAAGTTCGT CCTGCAATGG GAACGCGAAG CCCAGGCCAA CGGCGAACCG
GCCGTGTTCG ACCACGCCTT TATCGCCGAA CATGGCCATG GCGTCGATGA GTACCTGGCC
GTGGTGGACG CCACGCCGTG GTCGCACATC CAGGCACAGT CCGGCCTGAC CTTGGCCGAT
ATCGAACTGG CCGCGCGCAT GTACTGCCAG GGCAAGCGTG TGATCATGTG CTGGGCGATG
GGCATCACCC AACACCGTCA TTCGGTGCCG ACCATTCAGG AAATCGTCAA CCTGCAGATG
CTGCGTGGCA ACATCGGCGT GCCCGGCGCC GGCCTGTGCC CGGTGCGTGG CCACAGCAAC
GTGCAGGGTG ACCGCACCAT GGGCATCAAC GAGCGCCCGC CAGAGGCGCT GCTGGATGCC
ATCGAAAAGC GCTTTGGCTT CCCTGTGCCG CGGCGCAATG GCCATAACAC CGTCGAAGCC
ATTCATGCGA TGCTCGATGG CCGGGCCAAG GTTTTCATCG GCTTGGGCGG CAACTTCGCC
CAAGCCACAC CCGACACCGA GCGTACCGCC CAGGCGCTGC GCAACTGCGA GCTGACCGTG
CACATCAGCA CCAAGCTCAA CCGTAGCCAC CTGGTCCATG GCAAGCAGGC ACTGATCCTG
CCATGCCTGG GCCGCACCGA CATCGACCTG CAGGCCGACG GGCCGCAGGC AGTCACGGTG
GAAGACTCGT TCAGCATGGT CCATGCCTCC AACGGCCAGC TCAAGCCGCT GTCGACGCAA
ATGCGCTCGG AGCCTGCGGT GATCGCCGGC ATCGCTGCCG CCACGCTGGG CAAACAACCG
GTAGACTGGC ACTGGCTGGT GGCCGACTAC GACCGCATCC GCGACCTGAT CGGCGACACC
ATTCCCGGTT TCAGCGGCTT TAACCAGCGC CTGCGTAATC CGGGCGGCTT CTATCTGGGC
AACAGCGCGG CCAGCCGCGA ATGGGCGACC AGCACCGGCC GCGCCAACTT CAAGGCCAAC
CTGCTGCCCG ACACGCTGCT TGACGAACGC GTACGCGCCA GCGGCCAGTT GCCAGACTTG
ATCATGCAAT CGATGCGCTC GCACGATCAG TACAACACCA CTATCTACGG CCTGGACGAC
CGCTACCGCG GCGTGCGTGG CCAGCGCGAG GTGCTGTTCG CCAACGAAGC CGACATCATC
CGCCTGGGCT TCCAGCCGGG GCAGAAGGTC GACATCGTTT CGCTGTGGGG GGATGAACAT
GTGCGCCGGG TGCAAGGCTT TACCCTGCTG GCCTTCGACA TACCTGCCGG GCAGGCGGCG
GCATATTACC CGGAGGTGAA CCCGCTGGTG CCGCTGGAGA GCATTGGCGT GGGTAGCCAT
ACGCCGACAT CGAAGTTCAT TGCCATCAAG CTGGAGCGTG CGCGCGAGGA CGGGCGTATC
CTTTAA
 
Protein sequence
MTSYQQLPDN TPASPPRYKP YHGPAGGWGA LRSVAKAWVG SDNALKNIRA LLKTNQNGGF 
DCPGCAWGDS PESGMVKFCE NGAKAVNWEA TKRRVDAAFF ARYSVTSLLQ QSDYWLEYQG
RLTEPMVYDA PSDRYLPISW DAAFALIARE LNKLANPDQA EFYTSGRASN EAAYLYQLFV
RAYGTNNFPD CSNMCHEASG VALGQSVGVG KGTVTFDDFE HADAIFVWGQ NPGTNHPRML
DPLRDAVKRG AQVVCINPLK ERGLERFQHP QNPLEMLTNS DRPTNTAFFR PALGGDMAML
RGMAKFVLQW EREAQANGEP AVFDHAFIAE HGHGVDEYLA VVDATPWSHI QAQSGLTLAD
IELAARMYCQ GKRVIMCWAM GITQHRHSVP TIQEIVNLQM LRGNIGVPGA GLCPVRGHSN
VQGDRTMGIN ERPPEALLDA IEKRFGFPVP RRNGHNTVEA IHAMLDGRAK VFIGLGGNFA
QATPDTERTA QALRNCELTV HISTKLNRSH LVHGKQALIL PCLGRTDIDL QADGPQAVTV
EDSFSMVHAS NGQLKPLSTQ MRSEPAVIAG IAAATLGKQP VDWHWLVADY DRIRDLIGDT
IPGFSGFNQR LRNPGGFYLG NSAASREWAT STGRANFKAN LLPDTLLDER VRASGQLPDL
IMQSMRSHDQ YNTTIYGLDD RYRGVRGQRE VLFANEADII RLGFQPGQKV DIVSLWGDEH
VRRVQGFTLL AFDIPAGQAA AYYPEVNPLV PLESIGVGSH TPTSKFIAIK LERAREDGRI
L