| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_0238 |
|---|
| Symbol | ssuD |
|---|
| ID | 1043800 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida KT2440 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_002947 |
|---|
| Strand | + |
|---|
| Start bp | 292643 |
|---|
| End bp | 293791 |
|---|
| Gene Length | 1149 bp |
|---|
| Protein Length | 382 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 637143616 |
|---|
| Product | alkanesulfonate monooxygenase |
|---|
| Protein accession | NP_742406 |
|---|
| Protein GI | 26986981 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG2141] Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases |
|---|
| TIGRFAM ID | [TIGR03565] alkanesulfonate monooxygenase, FMNH(2)-dependent |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 6 |
|---|
| Fosmid unclonability p-value | 0.00889462 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGAGCCTTA ACATTTTCTG GTTCCTCCCC ACCCACGGTG ACGGCAAGTA CCTGGGCACT
TCCGAAGGCG CACGTGCGGT CGACCACGGT TACCTGCAGC AGATCGCGCA GGCTGCTGAC
CGCCTTGGTT TTGGTGGGGT GCTGATCCCG ACCGGGCGTT CCTGCGAGGA CTCCTGGCTG
GTGGCCGCGT CGCTGATCCC CGTGACCCAG CGCCTGAAGT TCCTTGTAGC CCTGCGCCCG
GGCATCATTT CGCCGACCGT GGCAGCACGC CAGGCGGCCA CCCTCGATCG CTTGTCCAAT
GGCCGTGCGC TATTCAACCT GGTGACCGGT GGTGATCCGG ACGAGCTGGC GGGTGATGGC
CTGCACCTGA ACCACCAGGA GCGCTACGAA GCTTCGGTCG AGTTCACCCG TATCTGGCGC
AAGGTGCTGG AAGGCGAAAA CGTCGATTAC GACGGTAAGC ACATCCAGGT AAAGGGCGCC
AAGCTGCTCT ACCCACCGAT TCAGCAACCA CGCCCACCGC TGTATTTCGG CGGCTCGTCC
GAGGCCGCCC AGGACCTGGC GGCCGAACAG GTCGAGCTGT ACCTGACCTG GGGCGAGCCA
CCGGCAGCTG TTGCCGAGAA GATCGCACAG GTGCGCGAAA AAGCGGCTGC TCAAGGGCGC
GAAGTACGCT TCGGTATCCG CCTGCACGTG ATCGTGCGGG AAACCAACGA AGAGGCTTGG
GCCGCCGCCG AGCGCCTGAT CTCGCACCTG GACGATGACA CCATCTCCCG CGCCCAGGCC
TCACTGGCGC GTTTCGACTC GGTGGGCCAG CAACGCATGG CCGCCCTGCA CGGCGGCAAC
CGCGACAACC TGGAAGTCAG CCCCAACCTG TGGGCAGGTG TTGGCCTGGT ACGGGGCGGC
GCGGGTACCG CGCTGGTGGG CGACGGCCCT ACCGTGGCAG CACGCGTCAA GGAATATGCC
GACTTGGGCA TCGATACCTT CATCTTCTCG GGTTATCCAC ACCTGGAAGA GTCTTACCGC
GTGGCGGAGC TGCTGTTCCC GCACCTGGAT GTGCAGCGCC CAGAGCAGCC GAAAGCCGGA
GGTTATGTAA GCCCGTTCGG CGAGATGGTG GCCAACGACA TCCTGCCCAA ATCTGTGTCG
CAGAGCTGA
|
|---|
| Protein sequence | MSLNIFWFLP THGDGKYLGT SEGARAVDHG YLQQIAQAAD RLGFGGVLIP TGRSCEDSWL
VAASLIPVTQ RLKFLVALRP GIISPTVAAR QAATLDRLSN GRALFNLVTG GDPDELAGDG
LHLNHQERYE ASVEFTRIWR KVLEGENVDY DGKHIQVKGA KLLYPPIQQP RPPLYFGGSS
EAAQDLAAEQ VELYLTWGEP PAAVAEKIAQ VREKAAAQGR EVRFGIRLHV IVRETNEEAW
AAAERLISHL DDDTISRAQA SLARFDSVGQ QRMAALHGGN RDNLEVSPNL WAGVGLVRGG
AGTALVGDGP TVAARVKEYA DLGIDTFIFS GYPHLEESYR VAELLFPHLD VQRPEQPKAG
GYVSPFGEMV ANDILPKSVS QS
|
|---|
| |