| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_0235 |
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| Symbol | lsfA |
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| ID | 1043789 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida KT2440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002947 |
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| Strand | + |
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| Start bp | 290081 |
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| End bp | 290719 |
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| Gene Length | 639 bp |
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| Protein Length | 212 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 637143613 |
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| Product | peroxidase |
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| Protein accession | NP_742403 |
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| Protein GI | 26986978 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0450] Peroxiredoxin |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 3 |
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| Fosmid unclonability p-value | 0.000145183 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGAGCCTCA AACTCGGCGA TATCGCCCCC GATTTCGAAC AGGATTCCAG CGAAGGCAAG
ATCCGCTTCC ACGAGTGGCT GGGCAACAGC TGGGGGGTGT TGTTCTCCCA CCCGGCCGAC
TTCACCCCGG TGTGCACCAC CGAGTTGGGC CTGACCGCCA AGCTGAAGGA CGAGTTTGCC
AAGCGCGGGG TCAAGGCCAT CGCCCTGTCG GTGGACCCGG TCGACTCGCA TCACAAGTGG
ATCGATGACA TCAACGAAAC ACAGAATACC GTGGTCAACT TCCCGATCAT TGCTGACGCT
GACCGCAAGG TGTCCGACCT TTACGACCTG ATCCACCCGA ACGCCAGCGA CACCCTGACC
GTGCGCTCGC TGTTCATCAT CGACCCGAAT AAAAAGGTGC GCCTGACCAT TACCTACCCG
GCCAGTACCG GGCGCAACTT CAACGAAATT CTGCGGGTGA TCGACTCGCT GCAGCTGACC
GACAACCACA AGGTCGCCAC ACCCGGTAAC TGGCAGGACG GCGACGAAGT GGTGATCGTG
CCTTCACTCA AAGATGAGGA GGAGATCAAG CAGCGCTTCC CCAAAGGTTA CCGGGCGGTC
AAACCCTATC TGCGCCTGAC CCCTCAACCC AATCGTTAA
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| Protein sequence | MSLKLGDIAP DFEQDSSEGK IRFHEWLGNS WGVLFSHPAD FTPVCTTELG LTAKLKDEFA
KRGVKAIALS VDPVDSHHKW IDDINETQNT VVNFPIIADA DRKVSDLYDL IHPNASDTLT
VRSLFIIDPN KKVRLTITYP ASTGRNFNEI LRVIDSLQLT DNHKVATPGN WQDGDEVVIV
PSLKDEEEIK QRFPKGYRAV KPYLRLTPQP NR
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