| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_0226 |
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| Symbol | |
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| ID | 1043771 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida KT2440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002947 |
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| Strand | - |
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| Start bp | 279579 |
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| End bp | 280247 |
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| Gene Length | 669 bp |
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| Protein Length | 222 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637143604 |
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| Product | polar amino acid ABC transporter inner membrane subunit |
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| Protein accession | NP_742394 |
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| Protein GI | 26986969 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0765] ABC-type amino acid transport system, permease component |
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| TIGRFAM ID | [TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.00679283 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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| |
Sequence |
| Gene sequence | ATGATCGCTG AAAGCCTGCA ACTCGTTGTC GACTCCGCGC CCTTCCTGCT GAAGGGCGCG
GGTTATACGG TGCTGCTCAG TGTCGGCGGC ATGTTCTTCG GTCTGGTGCT GGGCTTTGCC
CTGGCGCTGA TGCGGCTGTC GAAGATTCTG CCGCTGAACT GGCTGGCGCG GGTCTACGTG
TCGTTCTTCC GCGGCACGCC GCTGCTGGTG CAGCTGTTCG TCATCTATTT CGGCATGCCG
CAAATCGGCA TCGAGCTGGA CCCGATCCCC GCTTCGCTGA TCGGCCTGTC GCTGAACATG
GCGGCCTATA TCTGCGAGAT CCTGCGCGCA GCCATTTCCT CGATCGACCG GGGCCAGTGG
GAAGCAGCCG CCAGCATCGG CATGACCCGC GTGCAAGCCA TGCGCCGGGC GATCCTGCCA
CAGGCCTTGC GCACCGCGTT GCCACCGCTG GGCAACAGCT TCATCTCGCT GGTAAAGGAC
ACCGCCCTGG CGGCGACCAT CCAGGTGCCC GAGCTGTTCC GCCAAGCCCA GCTGATTACC
GCGCGCACGT TCGAAGTGTT CACCATGTAC GTGGCGGTCG CGGTCATCTA CTGGGTGCTG
TGCAGCATCC TTGCGCACTT CCAGAACCGC ATGGAAGCGC GGGTCAACCA GCATGACCAG
GAGCATTGA
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| Protein sequence | MIAESLQLVV DSAPFLLKGA GYTVLLSVGG MFFGLVLGFA LALMRLSKIL PLNWLARVYV
SFFRGTPLLV QLFVIYFGMP QIGIELDPIP ASLIGLSLNM AAYICEILRA AISSIDRGQW
EAAASIGMTR VQAMRRAILP QALRTALPPL GNSFISLVKD TALAATIQVP ELFRQAQLIT
ARTFEVFTMY VAVAVIYWVL CSILAHFQNR MEARVNQHDQ EH
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