Gene PP_0219 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPP_0219 
Symbol 
ID1043763 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida KT2440 
KingdomBacteria 
Replicon accessionNC_002947 
Strand
Start bp272023 
End bp272667 
Gene Length645 bp 
Protein Length214 aa 
Translation table11 
GC content62% 
IMG OID637143597 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionNP_742387 
Protein GI26986962 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG2011] ABC-type metal ion transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00606752 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGTGGATTG ATCGCCTGCT GGAAGGCTTG CTTGATACGC TGCTGATGGT TGGGGTTTCG 
TCACTGATCG CCCTGCTGGT GGGTGTACCC ATGGCGGTGC TGCTGGTGAC CAGCGACAAG
GGCGGGATCT TCGAGGCGCG GCTGCTGAAC CGGGTGCTGG GCGCCTTCGT CAACCTGTTC
CGCTCGATTC CCTTTCTGAT CCTGATGGTG GCGCTGATTC CATTCACCCG CCTGGTGGTG
GGTACCACTT ATGGTGTGTG GGCGGCAGTG GTGCCACTGA CCATTGCCGC CACACCGTTC
TTTGCGCGGA TTGCCGAGGT CAGCCTGCGT GAGGTCGACC ATGGTCTGGT GGAAGCCGCA
CAGGCCATGG GCTGCCGGCG CTGGCACATC GTCTGGCATG TACTGTTGCC CGAGGCGCTG
CCGGGGATCG TCGGGGGCTT CACCATTACC TTGGTGACCT TGATCAACTC GTCGGCGATG
GCCGGGGCGA TTGGTGCCGG CGGGCTGGGG GATATCGCCT ATCGGTATGG CTACCAGCGT
TTCGACAGCC AGATCATGCT GACCGTGATC GCCATGCTGG TAGCGTTAGT GGCGTTGATC
CAGCTGGGCG GGGACCGCCT GGCGAAGGGT TTGAACAAGC GTTGA
 
Protein sequence
MWIDRLLEGL LDTLLMVGVS SLIALLVGVP MAVLLVTSDK GGIFEARLLN RVLGAFVNLF 
RSIPFLILMV ALIPFTRLVV GTTYGVWAAV VPLTIAATPF FARIAEVSLR EVDHGLVEAA
QAMGCRRWHI VWHVLLPEAL PGIVGGFTIT LVTLINSSAM AGAIGAGGLG DIAYRYGYQR
FDSQIMLTVI AMLVALVALI QLGGDRLAKG LNKR