Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PP_0186 |
Symbol | hemC |
ID | 1043712 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida KT2440 |
Kingdom | Bacteria |
Replicon accession | NC_002947 |
Strand | + |
Start bp | 237981 |
End bp | 238922 |
Gene Length | 942 bp |
Protein Length | 313 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 637143564 |
Product | porphobilinogen deaminase |
Protein accession | NP_742355 |
Protein GI | 26986930 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0181] Porphobilinogen deaminase |
TIGRFAM ID | [TIGR00212] porphobilinogen deaminase |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCACTC GCGAAATCCG CATTGCCACC CGTAAAAGTG CTTTGGCCCT GTGGCAGGCC GAATACGTCA AGGCCCGCCT CGAGCAGGCC CACACCGGCC TGCAGGTGAC CCTGGTACCC ATGGTCAGTC GCGGTGACAA GTTGCTCGAC GCGCCGCTGG CAAAAATCGG CGGCAAGGGG CTGTTCGTCA AGGAACTGGA AACCGCGCTG CTGGACAACG AAGCCGACAT CGCCGTGCAC TCGATGAAAG ACGTGCCCAT GGACTTCCCC GAGGGCCTGG GCCTGTACTG CATCTGCGAG CGTGAAGACC CGCGTGATGC CTTCGTTTCC AATACCTTTG ACAGCCTCGA AGCGCTGCCC GCCGGCAGTA TCGTCGGTAC CTCAAGCCTG CGCCGTCAGG CCCAGTTACT GGCGCGCCGC CCAGACCTGC AAATCCGCTT TCTGCGCGGC AACGTCAACA CCCGCCTGGC GAAGCTGGAT GCCGGTGAGT ACGACGCCAT CATCCTCGCC GCGGCGGGCC TGATCCGTCT GGGCTTCGAA GACCGCATCA CCTCCACCAT CAGCGTCGAT GACAGCCTGC CGGCAGGTGG TCAGGGCGCG GTGGGCATCG AGTGCCGCAG TGCCGACGTT GAGATCCATG CACTGCTGGC GCCACTGCAC CATGTCGACA CCGCTGACCG GGTGATCGCC GAGCGCGCGC TGAACAAACG CCTGAATGGT GGCTGCCAAG TGCCGATCGC CTGCTACGCG GTACTTGAAG GTGACCAGCT GTGGCTGCGC GGCCTGGTCG GCCAGCCTAG CGGCGGGACC TTGCTGGTGG CCGATGCCCG TGCACCCCGT GCTGCTGCCG AGGCCCTGGG CGTACAGGTG GCCGAAGACC TGCTGGGGCA GGGCGCCGAG GCCATTCTGA AGGAAGTCTA CGGCGAGGCC GGTCACCCGT GA
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Protein sequence | MSTREIRIAT RKSALALWQA EYVKARLEQA HTGLQVTLVP MVSRGDKLLD APLAKIGGKG LFVKELETAL LDNEADIAVH SMKDVPMDFP EGLGLYCICE REDPRDAFVS NTFDSLEALP AGSIVGTSSL RRQAQLLARR PDLQIRFLRG NVNTRLAKLD AGEYDAIILA AAGLIRLGFE DRITSTISVD DSLPAGGQGA VGIECRSADV EIHALLAPLH HVDTADRVIA ERALNKRLNG GCQVPIACYA VLEGDQLWLR GLVGQPSGGT LLVADARAPR AAAEALGVQV AEDLLGQGAE AILKEVYGEA GHP
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