Gene PP_0173 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPP_0173 
Symbol 
ID1043699 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida KT2440 
KingdomBacteria 
Replicon accessionNC_002947 
Strand
Start bp225030 
End bp225659 
Gene Length630 bp 
Protein Length209 aa 
Translation table11 
GC content61% 
IMG OID637143551 
Producttranscriptional factor-related protein 
Protein accessionNP_742342 
Protein GI26986917 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCCAATT GCCATGCCCC ACGCATGCCG CCATCCTATT GCGGCAAGCC TAGACAAGGA 
CGTTATCTTT TGCCGTTCGC CACCACTCGC GCCACCCTCA GCCGACAGTG GGCGCTGCTG
CGCCAGTTGC CCAGCCGTTC CCCAGGCATA ACCAGCGCCG AGCTGGTCTG GCGCCTGCGT
GACGTTGGCT TCACGGTCAG CAAACGCACT GTCGAGCGTG ACCTCAACGA GCTTTCGCTG
ATATTCCCGC TGGAACGCAA TGACAAGAGC ATTCCATTCG GTTGGCACTG GTCGGCCAGT
GCCGTGGGCG AATTGCGCGG TAATTTCGAC TTGCTGACAC ATCTGCGAGG GGATGCGTTG
CAGCCATCGC AGGGTGAGGG CGTGGAGCTG GTGGCGCGAA TCAGCGATGC ACTGGCGCGG
CAGTTGCGGG ATGCGCCATT GAGCAGCGAC ATGCAACTGA CGGCACTGGA GCATGGGCAT
CGGTTACGCG GCACGGTAAG TGACGGCTGG CCATTACGCT GGTGGTTGTT GAGCCATGGG
GACAGGGTGG TGGTAGAGCA GCCTGCCGGC TTGCGGGAAG AGATTGGCAG GATTCTGAGC
AATGCGGCAG CTCAGTACCA GAATTTGTAG
 
Protein sequence
MANCHAPRMP PSYCGKPRQG RYLLPFATTR ATLSRQWALL RQLPSRSPGI TSAELVWRLR 
DVGFTVSKRT VERDLNELSL IFPLERNDKS IPFGWHWSAS AVGELRGNFD LLTHLRGDAL
QPSQGEGVEL VARISDALAR QLRDAPLSSD MQLTALEHGH RLRGTVSDGW PLRWWLLSHG
DRVVVEQPAG LREEIGRILS NAAAQYQNL