Gene PP_0171 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPP_0171 
Symbol 
ID1043696 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida KT2440 
KingdomBacteria 
Replicon accessionNC_002947 
Strand
Start bp223171 
End bp224034 
Gene Length864 bp 
Protein Length287 aa 
Translation table11 
GC content61% 
IMG OID637143549 
ProductABC transporter ATP-binding protein 
Protein accessionNP_742340 
Protein GI26986915 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1116] ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGCCC CATTGCCAGG CCACACGGCC AGCAACCTGA GCCGTGTTGC AACGCCGCCT 
TTGCTCAAGG TGGATAACCT CAGCCTCGAA TACCGTACTG CGCAACGCGT GGTGCGGGCC
ACCCATCAGG TCAGCTTCGA AGTCGACCGC GCTGATCGTT TTGTACTGCT CGGCCCCTCC
GGCTGTGGCA AGTCCACCCT GCTCAAAGCC GTGGCCGGTT TTATCCAGCC GCAAGAAGGC
CAGATTCTGC TGCAGGGCCA GACAGTTCGT GGCCCAGGCC CCGACCGCAT CGTGGTGTTC
CAGGAGTTTG ACCAGTTGCC GCCGTGGAAA ACGGTGAAGC AGAACGTCAT CTTTCCACTG
CTGGTGTCTG GCCAACTCAA GCGTGCGGAG GCGGAGGAGC GGGCGCTGCA TTATCTGGAG
AAGGTCGGTC TGGCCGCCTT TGCCGATGCT TATCCACACA CGTTGTCCGG TGGTATGAAG
GCACGTGTGG CAATTGCCCG GGCCTTGGCC ACCCAGCCCA AGATCCTGTT GATGGATGAG
CCGTTCGCCG CCCTGGATGC GCTGACCCGG CGCAAGATGC AGGAAGAGCT GTTGCTGCTG
TGGGAGGAAG TGCGGTTCAC CCTGTTGTTC GTCACCCACT CCATCGAAGA AGCACTGGTG
GTTGGCAACC GTATCCTGCT GTTGTCGCCG CACCCGGGGC GGGTGCGCGC CGAGGTGCAT
AGCCATCAAT ACGGCCTGGG CAGCCTGGGT GGCAGCGACT TCCAGGCCAG TGCCCGGCGT
ATCCACCGTT TGCTGTTCGA TGAAGCAGAT ATCCCGGAAC AGCCTGACAA CCTTGGGTTC
AACGATATTC GTATCGCTTA CTGA
 
Protein sequence
MTAPLPGHTA SNLSRVATPP LLKVDNLSLE YRTAQRVVRA THQVSFEVDR ADRFVLLGPS 
GCGKSTLLKA VAGFIQPQEG QILLQGQTVR GPGPDRIVVF QEFDQLPPWK TVKQNVIFPL
LVSGQLKRAE AEERALHYLE KVGLAAFADA YPHTLSGGMK ARVAIARALA TQPKILLMDE
PFAALDALTR RKMQEELLLL WEEVRFTLLF VTHSIEEALV VGNRILLLSP HPGRVRAEVH
SHQYGLGSLG GSDFQASARR IHRLLFDEAD IPEQPDNLGF NDIRIAY