| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_0162 |
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| Symbol | |
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| ID | 1043685 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida KT2440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002947 |
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| Strand | - |
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| Start bp | 185615 |
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| End bp | 186136 |
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| Gene Length | 522 bp |
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| Protein Length | 173 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637143540 |
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| Product | ECF subfamily RNA polymerase sigma factor |
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| Protein accession | NP_742331 |
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| Protein GI | 26986906 |
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| COG category | [K] Transcription |
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| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 3 |
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| Fosmid unclonability p-value | 0.000293029 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCCGGCGC CCTCCTCCAT GCCCAGCAAC GATTCCGTGC AAACGCTCTA CAGTGACCAC
CACGGCTGGT TGCATACCTG GCTGCGTAGC AAGCTCGGCA ACGCAGCCGA TGCGGCTGAC
CTCGCCCAGG ATACCTTCGT CCGCTTGCTA CAGCGTCGTG AACAATTGCA GCTGAATGCG
CCCAGGGCCT TCCTGCGCAC GGTAGCGCGT GGGCTGGTGA TCGATCATTG GCGCCGCGAG
GAACTGCACA GGGCCTATCT GGAGGCTTTG GCCCATGTGC CGGAAGCACT GGTCCCCTCA
GTCGAGACCC GCGAGCTGCT GCTGGAATTG CTTGAGCGTA TTGCACGCAT GCTCGACGGC
CTCAAACCCA AGGTACGTCG CGCATTCCTG CTGGCTCAAT GCGAGGGGCT GAAGCATCAG
GCCATCGCCG AACAGATGGG GATCTCCGTG CGCACCGTTG AGCGCTACAT CGCCAATGCG
CTCTATCACT GCTACGTGCT GCGCTATGAA GACGACTGCT GA
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| Protein sequence | MPAPSSMPSN DSVQTLYSDH HGWLHTWLRS KLGNAADAAD LAQDTFVRLL QRREQLQLNA
PRAFLRTVAR GLVIDHWRRE ELHRAYLEAL AHVPEALVPS VETRELLLEL LERIARMLDG
LKPKVRRAFL LAQCEGLKHQ AIAEQMGISV RTVERYIANA LYHCYVLRYE DDC
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