| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_0160 |
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| Symbol | |
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| ID | 1043683 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida KT2440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002947 |
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| Strand | - |
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| Start bp | 182074 |
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| End bp | 184560 |
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| Gene Length | 2487 bp |
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| Protein Length | 828 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 637143538 |
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| Product | TonB-dependent siderophore receptor |
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| Protein accession | NP_742329 |
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| Protein GI | 26986904 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG4773] Outer membrane receptor for ferric coprogen and ferric-rhodotorulic acid |
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| TIGRFAM ID | [TIGR01783] TonB-dependent siderophore receptor |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.728985 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 2 |
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| Fosmid unclonability p-value | 0.000124393 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGTCTACCA ACCCAGTGTT AACCCACACT TTCAGCCCGA ATGATTTTCG TCCAGTCCTG
CAATCAGCTC ACTTGCGCCA TGCCATCCGG GCTGTTCTGT TTGGTACCGC CCTGGGCCTG
GCAACTGTTC CGCAACTTTC CGTTGCGGCC GACACAGCCG AAGTGAGCCA ACACTATGCA
ATACCAGCTG GCCAACTGAC CGACGTGCTC AACACAATCG CTCGCCAGGC CGGGATCACC
CTATCGAGCA CGCCTCAGCT GACCGATGGC CTGCATTCCA ACGGACTGCA GGGGCAGTAC
ACAGCCGATC AGGCGCTGCG CCAGTTGCTG AATGGCAGCG GACTGGAAGC CGTCAGCCAG
GGGGGACGTA ACTATGTGCT GCAGGCACAG CGTCAGAACG CCGCCCTGGC ATTGCCAGAC
ACCGACATCC GTAGTTTCTC CCTCGGCAAC GCACTGGGCA GCATGGAGGG TTACAACGCC
ACGCACAGCC AGGTGGCGAC CAAGACCAGC ATGCCCTTGG TGGAGACATC CCAATCAGTC
TCGGTAGTTA CTCGCCAGCA AATGGATGAT CAGGGCTCTC AGACCGTTGC CCAAGCAATG
CGCTACACGC CTGGAGTACT GACCAACCCG TACGGTGCCA CTCATCGCTA TGACTATGTA
GCCATGCGCG GCTTCAACGA CGGCTCGGTG GACAACATCT ACGTCGATGG GCTCAAGTCA
ATGGGAGACA ACGGCACCTA CAGCACCATG CAGGTAGACC CATACTTCCT TGAGCGCATC
GACATTCTCA AGGGACCGTC TTCGGTACTG TACGGGCGAA GCTCGCCGGG TGGCCTGGTA
GCCCTGACCA CCAAGAAGCC ACTCTTTGCT CCTTACCATC AGGTTCAGGC CACTATGGGT
ACTCAGGGCC AGCGTGGCGT GGGCTTCGAC TTCAGTGGTC CTGTGGATGA CGACAAACGC
ATTGCGTATC GCCTGACGGG TTTGGCGGAC GCTTCCGACA CTCAGTTCGA CCACAACAAG
GAAGAACGTT ACGCCATCGC CCCTGCTATC AGTGTCGACT TCACCGAAGA CACCTCACTC
ACGCTGCAGG CCTATTTGCA GCACGACCCT AACGGTGGGT ACCACGGCGG CAACCCTGCA
GACGGTATGC TGCACAAGCG CAACGGCTTG CGCCTGTCAG ACCATTTCTT CGAAGGCGAG
CCGAGCATCG ACAACTACGA GCGCACGCAG CAATCCTTCA GCTACCAGTT TGAGCACCGC
TTCAATGATG TGTTCACCGC GCGGCAGAAC TTTCGCTATC AGGATTCCGA CGTGTCGATG
GACCAGGTGT ACTCCGCCGG CTGGGCAGAT GTGGACAGCA ATAGGCTAAA CCGCGCCTAT
ACCGGCGGCG ACGAGCGCCT GCATTCATAC ATCATTGATA ACATGCTGCA GGCAGAGTTT
TTTACTGGGG CAGCCAAGCA CACCCTGCTC TTGGGGGCTG ACTACCAGCG GCGCAAAGCC
GACGTGACAT GGCGTTATGG CACCGTCGAC CCGCTGGATG CTGGCAATCC GCAGTACGGC
AATGGCAACC TTCAGGTACT GGGCGAGAAC CGCTACCAGC GGCGTTTGCA ACAAACGGGC
GTGTACCTGC AGGATCTGGT GGAGCTGGAC CAGTGGCGCT TTTCCTTGGG ACTGCGCCAG
GACTGGGTGA AGGTGTCCGA AGAGAACCGT GACAGCGACA GCAAGGTCAG TGATCAACGC
TCCAGGTTCA CCTCCCGGGC TGGAGTGCTC TACCTGTTCG AGAACGGCAT TGCGCCCTAC
ATCAGCTACT CGGAGTCGTT CAACCCGAAC ACCGTGTCCG ACCAGCAAGG CCGGCCGCTG
GCGCCGACGG AGGGCACTCA GTGGGAAGCC GGCATCAAAT ATCAGCCACC AGGGAGCGAC
AACCTGTTCA CCGCATCGGT GTTCCGCATC GAGCAGGAGA ATTTGGCGTC TAAACAGCCT
GACGAAGACT TCTACCGCCC TGTCGGTGAA GTCCGCTCGC AAGGGCTGGA GCTGGAGGCC
CATGTGCAAC TGACCGACAG CCTCAAACTG CTGGGTGGCT ATACCTTCAC CGATATCGAG
TATTCGAAGT CAATGCCGAG CCTTGTGTCG GGCGACTTGG ACAACAAGGG TAATTCGCCG
ACTCAGGCGC CGAAACAGAT GCTCTCGCTG TGGGCCGACT ATAACTTCCG CCAGGGGGCA
CTGGATGGCC TGCGGCTGGG CGGTGGGGTG CGATATGTGG GGTACAGCTG GGTCGATGCG
GAAAACAGCA TGAAGGTGCC TTCCTACACC CTGTTCGACG CCTCGATCGG CTATGACCTG
GGCAAGCTCG GCCTGACGGG TGTGGATGTG CGCTTGAACG CCAACAACCT TACCAATGAA
AGCTACATCA CCTCATGTGC CAGCCTGAAC TACTGCTACA TGGGTGAAGA GCGCAATGTG
AGCGCCACGG TCAGCTATCA GTTCTAA
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| Protein sequence | MSTNPVLTHT FSPNDFRPVL QSAHLRHAIR AVLFGTALGL ATVPQLSVAA DTAEVSQHYA
IPAGQLTDVL NTIARQAGIT LSSTPQLTDG LHSNGLQGQY TADQALRQLL NGSGLEAVSQ
GGRNYVLQAQ RQNAALALPD TDIRSFSLGN ALGSMEGYNA THSQVATKTS MPLVETSQSV
SVVTRQQMDD QGSQTVAQAM RYTPGVLTNP YGATHRYDYV AMRGFNDGSV DNIYVDGLKS
MGDNGTYSTM QVDPYFLERI DILKGPSSVL YGRSSPGGLV ALTTKKPLFA PYHQVQATMG
TQGQRGVGFD FSGPVDDDKR IAYRLTGLAD ASDTQFDHNK EERYAIAPAI SVDFTEDTSL
TLQAYLQHDP NGGYHGGNPA DGMLHKRNGL RLSDHFFEGE PSIDNYERTQ QSFSYQFEHR
FNDVFTARQN FRYQDSDVSM DQVYSAGWAD VDSNRLNRAY TGGDERLHSY IIDNMLQAEF
FTGAAKHTLL LGADYQRRKA DVTWRYGTVD PLDAGNPQYG NGNLQVLGEN RYQRRLQQTG
VYLQDLVELD QWRFSLGLRQ DWVKVSEENR DSDSKVSDQR SRFTSRAGVL YLFENGIAPY
ISYSESFNPN TVSDQQGRPL APTEGTQWEA GIKYQPPGSD NLFTASVFRI EQENLASKQP
DEDFYRPVGE VRSQGLELEA HVQLTDSLKL LGGYTFTDIE YSKSMPSLVS GDLDNKGNSP
TQAPKQMLSL WADYNFRQGA LDGLRLGGGV RYVGYSWVDA ENSMKVPSYT LFDASIGYDL
GKLGLTGVDV RLNANNLTNE SYITSCASLN YCYMGEERNV SATVSYQF
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