Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PP_0141 |
Symbol | |
ID | 1043646 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida KT2440 |
Kingdom | Bacteria |
Replicon accession | NC_002947 |
Strand | - |
Start bp | 149027 |
End bp | 149818 |
Gene Length | 792 bp |
Protein Length | 263 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 637143513 |
Product | ABC transporter ATP-binding protein |
Protein accession | NP_742311 |
Protein GI | 26986886 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG1127] ABC-type transport system involved in resistance to organic solvents, ATPase component |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.0633689 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.467714 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGAGTGGCC AGAATTGCGT AATCGAAGCC CGCGGCATCT GCAACCGCTT CGGCCGCCAG GTGGTGCATG AAAACCTTGA CCTTGACCTG TACCGCGGCG AAATCCTCGC CGTGGTAGGC GGTTCAGGCA GCGGCAAATC GGTGCTTCTG CGCAGCATCA TTGGGCTGCG CCGGCCCAAT GAAGGGCAGA TCAAGGTGCT CGGCCAGGAC CTGACCGGCC TGCGCGAAGA ACAGCGTTCA CTGGTCGAGC GGCGCTTTGG CGTGCTGTTC CAGAAGGGGG CGCTGTTCTC TTCGCTGACG GTGACCGAAA ACGTGGCCTT GCCGCTGATC GAGCACGCTG GGCTGTCTCG TAGCGATGCC GAGCACCTGG CCGGGGTGAA ACTGGCCCTT GCCGGGTTGC CGATCTCGGC TGCCGACAAG TACCCGGCCT CGTTGTCGGG GGGCATGATC AAGCGCGCAG CGCTGGCCCG CGCCTTGGCC CTGGACCCGG ACATCCTGTT CCTCGACGAA CCCACGGCTG GCCTGGACCC GATCGGTGCC GCGGCATTTG ACCAGTTGAT CCTTACCCTG CGCGATGCGC TGGGCCTGTC GGTGTTCCTG ATCACCCACG ACCTCGACAC CCTGTACACC ATCACCGACC GCATCGCGGT GCTGTCGCAA AAGAAGGTCC TGGTGGCCGG CCCGCTGGCC GAGGTCGAGA AGACCAACGA CACCTGGATC CAAGAATACT TTCACGGCCC ACGCGGGCGC GCAGCCGAAC AGGCTGCCAC CCGTGCCGGG CAGGAGCGCT GA
|
Protein sequence | MSGQNCVIEA RGICNRFGRQ VVHENLDLDL YRGEILAVVG GSGSGKSVLL RSIIGLRRPN EGQIKVLGQD LTGLREEQRS LVERRFGVLF QKGALFSSLT VTENVALPLI EHAGLSRSDA EHLAGVKLAL AGLPISAADK YPASLSGGMI KRAALARALA LDPDILFLDE PTAGLDPIGA AAFDQLILTL RDALGLSVFL ITHDLDTLYT ITDRIAVLSQ KKVLVAGPLA EVEKTNDTWI QEYFHGPRGR AAEQAATRAG QER
|
| |