Gene PP_0141 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPP_0141 
Symbol 
ID1043646 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida KT2440 
KingdomBacteria 
Replicon accessionNC_002947 
Strand
Start bp149027 
End bp149818 
Gene Length792 bp 
Protein Length263 aa 
Translation table11 
GC content65% 
IMG OID637143513 
ProductABC transporter ATP-binding protein 
Protein accessionNP_742311 
Protein GI26986886 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG1127] ABC-type transport system involved in resistance to organic solvents, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0633689 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.467714 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGTGGCC AGAATTGCGT AATCGAAGCC CGCGGCATCT GCAACCGCTT CGGCCGCCAG 
GTGGTGCATG AAAACCTTGA CCTTGACCTG TACCGCGGCG AAATCCTCGC CGTGGTAGGC
GGTTCAGGCA GCGGCAAATC GGTGCTTCTG CGCAGCATCA TTGGGCTGCG CCGGCCCAAT
GAAGGGCAGA TCAAGGTGCT CGGCCAGGAC CTGACCGGCC TGCGCGAAGA ACAGCGTTCA
CTGGTCGAGC GGCGCTTTGG CGTGCTGTTC CAGAAGGGGG CGCTGTTCTC TTCGCTGACG
GTGACCGAAA ACGTGGCCTT GCCGCTGATC GAGCACGCTG GGCTGTCTCG TAGCGATGCC
GAGCACCTGG CCGGGGTGAA ACTGGCCCTT GCCGGGTTGC CGATCTCGGC TGCCGACAAG
TACCCGGCCT CGTTGTCGGG GGGCATGATC AAGCGCGCAG CGCTGGCCCG CGCCTTGGCC
CTGGACCCGG ACATCCTGTT CCTCGACGAA CCCACGGCTG GCCTGGACCC GATCGGTGCC
GCGGCATTTG ACCAGTTGAT CCTTACCCTG CGCGATGCGC TGGGCCTGTC GGTGTTCCTG
ATCACCCACG ACCTCGACAC CCTGTACACC ATCACCGACC GCATCGCGGT GCTGTCGCAA
AAGAAGGTCC TGGTGGCCGG CCCGCTGGCC GAGGTCGAGA AGACCAACGA CACCTGGATC
CAAGAATACT TTCACGGCCC ACGCGGGCGC GCAGCCGAAC AGGCTGCCAC CCGTGCCGGG
CAGGAGCGCT GA
 
Protein sequence
MSGQNCVIEA RGICNRFGRQ VVHENLDLDL YRGEILAVVG GSGSGKSVLL RSIIGLRRPN 
EGQIKVLGQD LTGLREEQRS LVERRFGVLF QKGALFSSLT VTENVALPLI EHAGLSRSDA
EHLAGVKLAL AGLPISAADK YPASLSGGMI KRAALARALA LDPDILFLDE PTAGLDPIGA
AAFDQLILTL RDALGLSVFL ITHDLDTLYT ITDRIAVLSQ KKVLVAGPLA EVEKTNDTWI
QEYFHGPRGR AAEQAATRAG QER