| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_0138 |
|---|
| Symbol | |
|---|
| ID | 1043641 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida KT2440 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_002947 |
|---|
| Strand | + |
|---|
| Start bp | 146242 |
|---|
| End bp | 147471 |
|---|
| Gene Length | 1230 bp |
|---|
| Protein Length | 409 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 637143510 |
|---|
| Product | nucleoside recognition domain protein |
|---|
| Protein accession | NP_742308 |
|---|
| Protein GI | 26986883 |
|---|
| COG category | [R] General function prediction only
[S] Function unknown |
|---|
| COG ID | [COG0700] Uncharacterized membrane protein
[COG2715] Uncharacterized membrane protein, required for spore maturation in B.subtilis. |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 0.684841 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTCAACG GCCTTTGGCT CGGCTTTTTC CTGGTGGCGG CGGTGTCCGC CATGGCCCAA
TGGCTGGTGG GTGGCAACGC AGGCATCTTC GCGGCAATGG TCGAAAGCAT CTTCGCCATG
GCCAAGCTGT CGGTCGAGGT GATGGTGCTG CTGTTCGGCA CACTGACCCT GTGGCTGGGC
TTTCTGAAGA TCGCCGAGAA GGCCGGTATC GTCGAGTGGC TGGCCAAGGT GCTAGGCCCG
CTGTTCGCCC GCCTGATGCC GGAGGTGCCG CCCGGCCACC CAGCCCTGGG CCTGATCACC
ATGAACTTCG CTGCCAACGG CCTGGGACTG GACAACGCTG CTACGCCGAT TGGCCTGAAG
GCCATGCGCG CGCTGCAGGA GCTGAACCCC GGCAGCACTA CCGCGAGCAA CGCGCAGATC
CTGTTCCTGG TGCTCAACGC CTCGTCGCTG ACCCTGCTGC CGGTAACCGT CTTCATGTAC
CGGGCCCAGC AAGGCGCGCC AGACCCGACC ATGGTGTTTC TGCCGATCCT GCTAGCGACC
AGCGTCTCGA CCCTGGTTGG TCTGCTGTCG GTGGCAGTGA TGCAGCGTTT GCGTCTGTGG
GACCCGGTGG TGCTTGCCTA CTTCATCCCC GGCGCTTTGC TGCTGGGAGG CTTCATGGCT
TTTCTTGGCA CCCTGTCGGC CGCCGCGCTG GCCAGCCTGT CGTCGCTCCT GGGCAACCTC
ACGCTGTTTG GCGTGATCAT GCTGTTCCTG GTGGTGGGCG CCCTGAAACG GGTGAAGGTG
TATGAAGCCT TTGTCGAAGG CGCCACGGAA GGCTTCGATG TGGCCAAGAG CCTGCTGCCC
TACCTGGTGG CGATGCTGGT GGCGGTGGGT GTGCTGCGCG CCTCTGGTGC CCTGGAGCTG
GCCCTGGACG GTATCCGCCA TGCGGTTAGC TGGATGGGCC TGGACACGCG CTTCGTCGAG
GGCCTGCCCA CCGCGCTGGT CAAGCCGTTC TCTGGCAGCG CAGCGCGGGC AATGCTGATC
GAGACCATGC AGACCCAAGG CGTGGACAGT TTCCCTGCCT TGGTGGCAGC GACGATTCAG
GGCAGCACCG AAACCACCTT CTACGTACTG GCCGTGTACT TTGGTGCCGT GGGCATCCAG
CGCGTGCGCC ATGCGGTCGG TTGCGCACTG CTGGCCGAGT TTTCAGGGGT AGTCGCGGCG
ATCTTCGTCT GCTACTGGTT CTTTGCCTGA
|
|---|
| Protein sequence | MLNGLWLGFF LVAAVSAMAQ WLVGGNAGIF AAMVESIFAM AKLSVEVMVL LFGTLTLWLG
FLKIAEKAGI VEWLAKVLGP LFARLMPEVP PGHPALGLIT MNFAANGLGL DNAATPIGLK
AMRALQELNP GSTTASNAQI LFLVLNASSL TLLPVTVFMY RAQQGAPDPT MVFLPILLAT
SVSTLVGLLS VAVMQRLRLW DPVVLAYFIP GALLLGGFMA FLGTLSAAAL ASLSSLLGNL
TLFGVIMLFL VVGALKRVKV YEAFVEGATE GFDVAKSLLP YLVAMLVAVG VLRASGALEL
ALDGIRHAVS WMGLDTRFVE GLPTALVKPF SGSAARAMLI ETMQTQGVDS FPALVAATIQ
GSTETTFYVL AVYFGAVGIQ RVRHAVGCAL LAEFSGVVAA IFVCYWFFA
|
|---|
| |