Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PP_0126 |
Symbol | |
ID | 1043621 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida KT2440 |
Kingdom | Bacteria |
Replicon accession | NC_002947 |
Strand | + |
Start bp | 131808 |
End bp | 132425 |
Gene Length | 618 bp |
Protein Length | 205 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 637143498 |
Product | cytochrome c4 |
Protein accession | NP_742296 |
Protein GI | 26986871 |
COG category | [C] Energy production and conversion |
COG ID | [COG2863] Cytochrome c553 |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
|
Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.813624 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAACAAAC TAGTCGTGAG TCTGCTGTTG ACCTTGGGTG TCGCTGGTGC GGCCACTGCT GCGCAACCTA TCAAAGGCGA TGCCGCCGCT GGCCAGGCCA AGACCGCCGT GTGTGGCGCC TGCCACAATC CCGACGGCAA CAGCCTGGCA CCGAACTTCC CGAAACTGGC CGGCCAAGGC CAGCGCTATC TCGAAAAACA ACTTCACGAT ATCAAGTCGG GCAAGCGTAC CGTGCTGGAA ATGACCGGCA TGCTGGCCGC ATTCAGCGAC CAGGATCTGG CCGATATCGC CGCCTACTTC TCCAGCCAAA AAGGCAGCGT GGGGGCCGCC GATCCCAAGC TGGTCGAGCG CGGCCGCGCG TTGTTCAATG GCGGCGACCT GGAAAAGGGC ATGCCGGCCT GCACTGGCTG CCACTCGCCC AACGGCGCGG GCATCGCCCT GGCCGGCTTC CCGCACCTGG GCGGGCAACA CTCGCAGTAC GTGGCCAAGC AGCTCACTGA CTTCCGCGAA GGCAACCGCA CCAACGATGG CGATGCCATG ACCATGCGCA CCATCGCTGG CAAGCTGAGC AACCATGACA TCGAAGCGTT GGCCAGCTAC ATCCAGGGCC TGCATTAA
|
Protein sequence | MNKLVVSLLL TLGVAGAATA AQPIKGDAAA GQAKTAVCGA CHNPDGNSLA PNFPKLAGQG QRYLEKQLHD IKSGKRTVLE MTGMLAAFSD QDLADIAAYF SSQKGSVGAA DPKLVERGRA LFNGGDLEKG MPACTGCHSP NGAGIALAGF PHLGGQHSQY VAKQLTDFRE GNRTNDGDAM TMRTIAGKLS NHDIEALASY IQGLH
|
| |