| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_0123 |
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| Symbol | polA |
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| ID | 1043618 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida KT2440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002947 |
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| Strand | + |
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| Start bp | 127522 |
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| End bp | 130269 |
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| Gene Length | 2748 bp |
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| Protein Length | 915 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637143495 |
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| Product | DNA polymerase I |
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| Protein accession | NP_742293 |
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| Protein GI | 26986868 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0258] 5'-3' exonuclease (including N-terminal domain of PolI)
[COG0749] DNA polymerase I - 3'-5' exonuclease and polymerase domains |
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| TIGRFAM ID | [TIGR00593] DNA polymerase I |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.121989 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCCAAG CGCCCCTCGT CCTGGTGGAC GGTTCCTCCT ACCTTTATCG CGCCTTCCAC
GCGCTGCCAC CGCTGACCAC GTCCAAGGGC ATGCCGACCG GTGCGGTGAA GGGTGTGCTG
AACATGCTCA AGAGCCTGCG CAAGCAATAT CCCGACAGCC TGTTCGCCGT GGTGTTCGAC
GCCAAGGGCG GCACTTTCCG CGATGCCATG TTCGCTGAGT ACAAGGCCAA CCGCCCCAGC
ATGCCGGATG ACCTGCGGGT ACAGATCGAG CCGCTGCACG CCAGCGTCAA GGCGCTGGGC
TACCCGCTGC TGTGCGTGGA GGGTGTCGAG GCTGACGACG TGATCGGCAC CCTGGCGCGC
AGCAGTGCCG CCCTGGGTCG CCCGGTGATC ATCTCGACCG GTGACAAGGA CATGGCGCAA
CTGGTGGACG GGCACATTAC CTTGGTCAAC ACCATGACCG GAAGCGTGCT GGACGTGGCT
GGCGTGCACG AGAAATTCGG CGTCGGCCCG GAACACATTA TCGACTTCCT GGCCCTGATG
GGTGACAAGG TCGACAACAT CCCCGGCGTG CCGGGCGTGG GCGAAAAAAC GGCGGTGGGG
CTGTTGACCG GCATCGGCGG CGGTCTCAGC GACCTTTACG CCAACCTGGA CAAAGTGCCA
GCGCTGGCCA TTCGCGGCGC CAAGACCTTG CCGGCCAAGC TGGAGGAGCA CCGCGACGCG
GCATTCCTGT CCTACGAACT GGCCACCATC AAGGTTGACG TGCCGCTGGA TGTGGAGGTC
GAGGCGCTGG TGTGCGGTGA ACCTGACCGC GAGGCGCTGC TGGCGTTGTA CACCGAGATG
GAGTTCAAGA GCTGGGTCGC CGAATTGCAG CGCGATGCGG CCAAGGCCGG TGACGATGTT
GCCCCGGCCG TGGAGCCTGC GGTCAAGGTC GAGGCCAAAT ACGAAACCAT TCTCGACCAG
GCCCGTTTCG ACGCCTGGCT GGAGAAGCTG CGCCAGGCAC CGCTGTTTGC CTTCGACACC
GAGACCACCG GCCTGGACGC CCAGCAGGCG CAGTTGGTCG GCCTGTCCTT CGCAGTCGAG
CCGCATGAAG CGGCCTATGT GCCGCTGGCC CACGATTACG AAGGCGCGCC GGTCCAGCTG
GACCGCGAGG CCGTGCTGCT GGCGCTGAAA CCACTGCTGG AGGACCCGGC CAAGGCCAAG
GTCGGGCAGA ACGCCAAGTA CGACATCAAC ATCCTCGCCA ATGGCTCCCC CGCCATCGAG
ATGCGCGGTG TGGCCTACGA CACCATGCTC GAGTCGTACG TGCTGAACTC CACCGCCACC
CGTCATGACA TGGACAGCCT GGCGCAGAAG TACCTCGACC ACACCACGAT CGCCTTCGAG
GACATCGCCG GCAAGGGTGC CAAGCAGCTT ACCTTCAACC AGATCAACCT GGACAAGGCC
GGCCCCTACG CCGCCGAGGA CGCCGACATC ACCCTGCGCC TGCACCATGC ATTGCAGGCC
CGCCTGGCAC AGACGCCGAG CGTGCAACCG GTGCTGATGG ATATCGAGAT GCCGCTGGTG
CCGGTGCTGG CCAGGATCGA GCGCCAGGGT GCACTGGTCG ATGCCGAGCT GTTGAAAGTA
CAGAGCGGTG AGCTGGGCGT GAAGATGGCT GAGCTGGAGC TGCGTGCCTA CGAGCTCGCC
GGTGAGACGT TCAACCTCGG CTCGCCCAAG CAGCTGGGCA CGATCCTTTA CGACAAGCTG
GGCATGCCGG TGTTGAGCAA GACCGCCAAG GGCCAGCCAT CCACCGCCGA AGCAGTGCTC
GACGAACTGG CCTTGCAAGG CTACCCGCTG CCAGAGGTGC TGATGCAGTA CCGCAGCCTG
AGCAAGCTCA AGAGCACCTA CACCGACAAG TTACCGGGGC AGATCAACCC GCGCACCGGG
CGTATCCACA CGTCCTACCA GCAGGCCGTG GCGGCCACCG GCCGGTTGTC GTCGAGCGAC
CCGAACTTGC AGAACATCCC GATCCGCACC GCTGAAGGGC GGCGTATCCG CCAGGCGTTC
ATCGCCAGTC CGGGTTACAA GCTTCTGGCG GCGGACTATT CACAGATCGA GCTGCGTATC
ATGGCCCACC TGGCCAAGGA CGAAGGCTTG CTGCATGCCT TCCGCAATGA CCTGGACGTG
CACCGCGCCA CAGCAGCCGA AGTGTTCGGT GTGGCCCTGG AAGACGTGAC CACCGACCAG
CGCCGCAGCG CCAAGGCCAT CAACTTCGGC CTGATCTACG GCATGAGCGC CTTTGGCCTG
GCCAAGCAGA TCGGCGTCGA CCGCAAGCAG TCACAGGACT ATATCGACCG CTACTTTGCC
CGCTACCCAG GCGTGCTGGC CTACATGGAG CGCACCCGCG CCCAGGCGGC CGAGCAAGGC
TTTGTCGAAA CCCTGTTTGG CCGCCGCCTG TACTTGCCAG ACATCAATGC CAAGAACCCT
GCCCTGCGCA AGGGCGCCGA GCGCACGGCG ATCAACGCCC CGATGCAGGG TACTGCTGCC
GACATCATCA AGCGGGCCAT GGTCAAGGTA GATAACTGGT TGAGCGAGAG CGGGCTGGAT
GCCCGGGTGA TCCTGCAGGT GCACGACGAA CTGGTGCTTG AAGTACGCGA GGACCTGGTG
CAGCAGGTGA AAGATGAAAT TCGCCAGCAC ATGAGCCAGG CCGCGCAGCT GGATGTGCCG
CTGCTTGTCG AAGCAGGCGT TGGTGCGAAT TGGGACGAAG CTCACTGA
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| Protein sequence | MSQAPLVLVD GSSYLYRAFH ALPPLTTSKG MPTGAVKGVL NMLKSLRKQY PDSLFAVVFD
AKGGTFRDAM FAEYKANRPS MPDDLRVQIE PLHASVKALG YPLLCVEGVE ADDVIGTLAR
SSAALGRPVI ISTGDKDMAQ LVDGHITLVN TMTGSVLDVA GVHEKFGVGP EHIIDFLALM
GDKVDNIPGV PGVGEKTAVG LLTGIGGGLS DLYANLDKVP ALAIRGAKTL PAKLEEHRDA
AFLSYELATI KVDVPLDVEV EALVCGEPDR EALLALYTEM EFKSWVAELQ RDAAKAGDDV
APAVEPAVKV EAKYETILDQ ARFDAWLEKL RQAPLFAFDT ETTGLDAQQA QLVGLSFAVE
PHEAAYVPLA HDYEGAPVQL DREAVLLALK PLLEDPAKAK VGQNAKYDIN ILANGSPAIE
MRGVAYDTML ESYVLNSTAT RHDMDSLAQK YLDHTTIAFE DIAGKGAKQL TFNQINLDKA
GPYAAEDADI TLRLHHALQA RLAQTPSVQP VLMDIEMPLV PVLARIERQG ALVDAELLKV
QSGELGVKMA ELELRAYELA GETFNLGSPK QLGTILYDKL GMPVLSKTAK GQPSTAEAVL
DELALQGYPL PEVLMQYRSL SKLKSTYTDK LPGQINPRTG RIHTSYQQAV AATGRLSSSD
PNLQNIPIRT AEGRRIRQAF IASPGYKLLA ADYSQIELRI MAHLAKDEGL LHAFRNDLDV
HRATAAEVFG VALEDVTTDQ RRSAKAINFG LIYGMSAFGL AKQIGVDRKQ SQDYIDRYFA
RYPGVLAYME RTRAQAAEQG FVETLFGRRL YLPDINAKNP ALRKGAERTA INAPMQGTAA
DIIKRAMVKV DNWLSESGLD ARVILQVHDE LVLEVREDLV QQVKDEIRQH MSQAAQLDVP
LLVEAGVGAN WDEAH
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