| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_0110 |
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| Symbol | cyoE-1 |
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| ID | 1043599 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida KT2440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002947 |
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| Strand | + |
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| Start bp | 115697 |
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| End bp | 116590 |
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| Gene Length | 894 bp |
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| Protein Length | 297 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637143482 |
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| Product | protoheme IX farnesyltransferase |
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| Protein accession | NP_742280 |
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| Protein GI | 26986855 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0109] Polyprenyltransferase (cytochrome oxidase assembly factor) |
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| TIGRFAM ID | [TIGR01473] protoheme IX farnesyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.463624 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.446802 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGCGACGC TTCTAAGCGT ACGACGGGCC CGCTGGCGCG ATTACCTTGA GCTGACCAAG
CCCAAGGTGG TGGTGCTGAT GCTGATCACC TCGCTGGCGG GCATGTTCCT GGCCACCCGG
GCGGGCGTCA GCTGGAGCGT GCTGTTGTTC GGCAACCTGG GCATCGGCCT GTGTGCGGGT
GGTGCGGCAG TGGTCAATCA TGTGGTGGAT CGGCGCATTG ATGCGCTGAT GGCACGCACC
CACAAACGGC CTTTGGCCCA AGGCCGAGTC GAGCCCCTGC CGGCGCTGTT GTTCGCCTTG
GCCCTGGCGC TGCTGGGCAT GGTCCTGCTG CTGGTGTTCA CCAACGCCCT CACCGCCTGG
CTGACCCTGG CCTCATTACT CGGTTATGCG GTGCTCTACA CCGGCTTTCT CAAGCGCGCC
ACGCCACAGA ACATCGTCAT CGGTGGCCTG GCCGGTGCCG CTCCGCCGTT GCTCGGCTGG
GTGGCGGTAA GCGGCCATGT CAGCGCCGAA CCCTTGCTGC TTGTGTTGAT CATTTTCGCC
TGGACCCCGC CGCATTTCTG GGCGCTGGCC ATCCACCGCA AGGAGGAATA CGCCAAGGCC
GATATCCCGA TGTTGCCGGT GACCCACGGC GAGCGCTACA CCAAACTGCA TATCCTGCTG
TACACCCTGA TCCTGCTGGC AGTGAGCCTG CTCCCGTATG CCATCCACAT GAGTGGCCCG
CTGTACCTGG TCTGTGCCCT AGCCTTGGGC CTGCGCTTCC TGCAATGGGC TTGGGTGTTG
TACCGTAGCA GCCGGCCGCA CGCGGCGATC GGCACCTTCA AGTACTCTAT CGGCTACCTG
TTCGCGCTGT TCATTGCGTT GCTTCTTGAC CACTACCTGT TGCTGAACCT ATGA
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| Protein sequence | MATLLSVRRA RWRDYLELTK PKVVVLMLIT SLAGMFLATR AGVSWSVLLF GNLGIGLCAG
GAAVVNHVVD RRIDALMART HKRPLAQGRV EPLPALLFAL ALALLGMVLL LVFTNALTAW
LTLASLLGYA VLYTGFLKRA TPQNIVIGGL AGAAPPLLGW VAVSGHVSAE PLLLVLIIFA
WTPPHFWALA IHRKEEYAKA DIPMLPVTHG ERYTKLHILL YTLILLAVSL LPYAIHMSGP
LYLVCALALG LRFLQWAWVL YRSSRPHAAI GTFKYSIGYL FALFIALLLD HYLLLNL
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