Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PP_0105 |
Symbol | |
ID | 1043591 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida KT2440 |
Kingdom | Bacteria |
Replicon accession | NC_002947 |
Strand | + |
Start bp | 111579 |
End bp | 112145 |
Gene Length | 567 bp |
Protein Length | 188 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 637143477 |
Product | cytochrome C oxidase assembly protein |
Protein accession | NP_742275 |
Protein GI | 26986850 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG3175] Cytochrome oxidase assembly factor |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.257574 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.281788 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACGGCC TGTCGGTGAA ACGCCTGGTA ACGCGCCTGT TGATGCTGAC GGTGGTGATG TTCGCCTTCG GCTTCGCGCT GGTGCCGATC TACGACGTCA TGTGCAAAGC CTTCGGTATC AACGGCAAGA CCGGCGGCCA ATACGAAGGT AGCCAGGTCA GTGACCCGAC GCGTGCTGTG CGGGTGCAGT TCATGTCGAC CAATGCCAGC GACATGGTCT GGGACTTCTA CTCCACTGCC GACCAGCTGG AGGTCAACCC GGGGGCGGTG AACCAGATGA TCTTCATTGC CCACAACCCG ACCGACCGGC CGATGAGTGC GCAGGCAATA CCCAGCATTA CCCCGGCCGA GGCCGCGGCC TACTTCCACA AGACCGAGTG CTTCTGCTTT ACCCAGCAGG TGCTGCAGCC CGGCGAACGC ATCGAGATGC CGGTGCGCTT CATCGTCGAC CGCGACCTGC CGGCCAGCGT GAAGCACCTG ACACTGGCCT ACACCTTGTT CGACATCACC GCTCGCCACC CGCCGGTCGC GCACGTTGCG GCGCAGGACG TCCAGGGCGC CCGTTAA
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Protein sequence | MNGLSVKRLV TRLLMLTVVM FAFGFALVPI YDVMCKAFGI NGKTGGQYEG SQVSDPTRAV RVQFMSTNAS DMVWDFYSTA DQLEVNPGAV NQMIFIAHNP TDRPMSAQAI PSITPAEAAA YFHKTECFCF TQQVLQPGER IEMPVRFIVD RDLPASVKHL TLAYTLFDIT ARHPPVAHVA AQDVQGAR
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