| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_0104 |
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| Symbol | |
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| ID | 1043590 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida KT2440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002947 |
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| Strand | + |
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| Start bp | 109980 |
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| End bp | 111569 |
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| Gene Length | 1590 bp |
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| Protein Length | 529 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 637143476 |
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| Product | cytochrome c oxidase, subunit I |
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| Protein accession | NP_742274 |
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| Protein GI | 26986849 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0843] Heme/copper-type cytochrome/quinol oxidases, subunit 1 |
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| TIGRFAM ID | [TIGR02891] cytochrome c oxidase, subunit I |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.0543399 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.340951 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTGCAG TGATCGACGA CCACGCCCAC GGCCACGACC ATGCGCACGG CCCGGCCAAG
GGCCTGATGC GCTGGGTGCT GACCACCAAC CATAAAGACA TCGGCACGAT GTACCTGTGG
TTCAGTTTCA TCATGTTCCT GCTCGGTGGC TCGTTTGCCA TGGTGATCCG CGCTGAGCTG
TTCCAGCCGG GTTTGCAGAT CGTGGAGCCG GCGTTCTTCA ACCAGATGAC CACCATGCAT
GGCCTGATCA TGGTGTTTGG CGCGGTGATG CCGGCCTTCG TCGGCCTGGC CAACTGGATG
ATTCCGCTGA TGATCGGCGC GCCCGACATG GCACTGCCAC GGATGAACAA CTTCAGCTTC
TGGCTGCTGC CGGCGGCCTT CCTGCTGCTG GTATCGACGC TGTTCAGCCC GGGCGGAGGG
CCAAACTTTG GCTGGACCTT CTACGCTCCG CTTTCCACCA CCTATGCGCC AGCCAGCGTC
ACCTTCTTCA TCTTCGCCAT CCACCTGATG GGTATCAGCT CGATCATGGG GGCGATCAAC
GTGATTGCCA CCATCCTCAA CCTGCGTGCC CCCGGCATGA CGCTGATGAA AATGCCGCTG
TTCGTCTGGA CCTGGCTGAT CACCGCGTTC CTGCTGATTG CGGTGATGCC AGTACTGGCC
GGCGTGGTAA CCATGATGCT GATGGATATC CACTTCGGTA CCAGCTTTTT CAGTGCCGCA
GGTGGCGGTG ACCCGGTGCT GTTCCAGCAT GTGTTCTGGT TCTTCGGCCA CCCTGAGGTT
TACATCATGA TCCTGCCCGC CTTCGGTGCG GTCAGCTCGA TCATCCCGGC GTTCTCGCGC
AAGCCGCTGT TCGGTTATAC CTCGATGGTG TATGCCACCG GCGCCATTGC CTTCCTGTCA
TTCATCGTCT GGGCCCACCA TATGTTTGTG GTCGGTATCC CGGTGGTCGG CGAGTTGTTC
TTCATGTACG CCACCATGCT GATTGCCGTG CCCACCGGGG TGAAGGTATT CAACTGGGTC
AGCACCATGT GGGAAGGTTC GCTCACCTTC GAAACGCCGA TGCTGTTCGC CATCGCCTTT
GTCATCCTGT TCACCATCGG GGGTTTCTCC GGGTTGATGC TGGCGATCGC CCCGGCAGAC
TTCCAGTACC ACGACACTTA CTTCGTGGTG GCGCATTTCC ACTACGTACT GGTGCCTGGT
GCAATTTTCG GCATCTTTGC CTCGGCCTAC TACTGGCTGC CGAAATGGAC CGGCCACATG
TACGACGAAA CCCTCGGCAA ACTGCACTTC TGGCTGTCGT TCGTCGGCAT GAACATGGCC
TTCTTCCCCA TGCACTTCGT AGGCTTGGCC GGCATGCCAC GGCGCATCCC CGACTACAAC
CTGCAGTTCG CCGATTTCAA CATGGTGTCG TCGATCGGCG CGTTCATGTT CGGCGCCACG
CAGATCTTCT TCCTGTTCAT TGTCATCAAG TGCATCCGCG GTGGCGCGCC GGCACCGGCC
AAACCCTGGG ATGGCGCCGA GGGCCTTGAG TGGTCGATAC CCTCGCCTGC GCCCTACCAC
ACCTTCCAGA CACCCCCGGA AGTGAAATAG
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| Protein sequence | MSAVIDDHAH GHDHAHGPAK GLMRWVLTTN HKDIGTMYLW FSFIMFLLGG SFAMVIRAEL
FQPGLQIVEP AFFNQMTTMH GLIMVFGAVM PAFVGLANWM IPLMIGAPDM ALPRMNNFSF
WLLPAAFLLL VSTLFSPGGG PNFGWTFYAP LSTTYAPASV TFFIFAIHLM GISSIMGAIN
VIATILNLRA PGMTLMKMPL FVWTWLITAF LLIAVMPVLA GVVTMMLMDI HFGTSFFSAA
GGGDPVLFQH VFWFFGHPEV YIMILPAFGA VSSIIPAFSR KPLFGYTSMV YATGAIAFLS
FIVWAHHMFV VGIPVVGELF FMYATMLIAV PTGVKVFNWV STMWEGSLTF ETPMLFAIAF
VILFTIGGFS GLMLAIAPAD FQYHDTYFVV AHFHYVLVPG AIFGIFASAY YWLPKWTGHM
YDETLGKLHF WLSFVGMNMA FFPMHFVGLA GMPRRIPDYN LQFADFNMVS SIGAFMFGAT
QIFFLFIVIK CIRGGAPAPA KPWDGAEGLE WSIPSPAPYH TFQTPPEVK
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