Gene PP_0100 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPP_0100 
SymbolcynT 
ID1043582 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida KT2440 
KingdomBacteria 
Replicon accessionNC_002947 
Strand
Start bp105206 
End bp105925 
Gene Length720 bp 
Protein Length239 aa 
Translation table11 
GC content61% 
IMG OID637143472 
Productcarbonate dehydratase 
Protein accessionNP_742270 
Protein GI26986845 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0288] Carbonic anhydrase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0551844 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCGTCA AGGACCCATC CAAGGTCGTA CCGCAGGTCC CCGCGGAAAG CGCCGATGCT 
GCCCTCAAGC ACATCGTCGA CGGCTTCCTG CGCTTTCACC ATGATGTTTT CCCTGATCAG
CAAGAGCTGT TCAAGAAGCT CGCCACCGCG CAAACCCCAC GCGCCATGTT CATCACCTGT
GCCGACTCGC GCATCGTTCC CGAGCTGATC ACCCAGAGCT CGCCAGGCGA CCTGTTCGTG
ACCCGTAACG TGGGTAACGT GGTACCGCCT TATGGCCAGA TGAACGGGGG CGTTTCCAGC
GCCATCGAGT ACGCCGTAAT GGCGCTTAAA GTGCACCACA TCATCATCTG TGGCCACTCC
GACTGTGGCG CCATGCGTGC GGTACTGAAC CCGCAGTCGC TGACCAAGAT GCCTACTGTT
GGCGCCTGGT TGCGCCACGC TGAAGTGGCC CGCACCGTGG TCGAGAACAA CTGCTCCTGC
GGCAGCGAAC ACGAGACGAT GCAAGTGCTG ACCAAAGAGA ACGTCATCGC CCAGCTGCAT
CACTTGCGCA CCCATCCTTC GGTGGCCTCG CGCCTGGCAG CCGGTGAGCT GTTCATTCAT
GGTTGGGTGT ACGACATCGA GACCAGCAAG ATCGAAGCCT ACGACGCCGC CAGCGACAGC
TTCCTGCCCT TGGCCGCGGG TGAACCCGTT CCCTGCGCCA CTCCGAGAGG CCGCTACTAA
 
Protein sequence
MPVKDPSKVV PQVPAESADA ALKHIVDGFL RFHHDVFPDQ QELFKKLATA QTPRAMFITC 
ADSRIVPELI TQSSPGDLFV TRNVGNVVPP YGQMNGGVSS AIEYAVMALK VHHIIICGHS
DCGAMRAVLN PQSLTKMPTV GAWLRHAEVA RTVVENNCSC GSEHETMQVL TKENVIAQLH
HLRTHPSVAS RLAAGELFIH GWVYDIETSK IEAYDAASDS FLPLAAGEPV PCATPRGRY