Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PP_0100 |
Symbol | cynT |
ID | 1043582 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida KT2440 |
Kingdom | Bacteria |
Replicon accession | NC_002947 |
Strand | + |
Start bp | 105206 |
End bp | 105925 |
Gene Length | 720 bp |
Protein Length | 239 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 637143472 |
Product | carbonate dehydratase |
Protein accession | NP_742270 |
Protein GI | 26986845 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0288] Carbonic anhydrase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.0551844 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCCGTCA AGGACCCATC CAAGGTCGTA CCGCAGGTCC CCGCGGAAAG CGCCGATGCT GCCCTCAAGC ACATCGTCGA CGGCTTCCTG CGCTTTCACC ATGATGTTTT CCCTGATCAG CAAGAGCTGT TCAAGAAGCT CGCCACCGCG CAAACCCCAC GCGCCATGTT CATCACCTGT GCCGACTCGC GCATCGTTCC CGAGCTGATC ACCCAGAGCT CGCCAGGCGA CCTGTTCGTG ACCCGTAACG TGGGTAACGT GGTACCGCCT TATGGCCAGA TGAACGGGGG CGTTTCCAGC GCCATCGAGT ACGCCGTAAT GGCGCTTAAA GTGCACCACA TCATCATCTG TGGCCACTCC GACTGTGGCG CCATGCGTGC GGTACTGAAC CCGCAGTCGC TGACCAAGAT GCCTACTGTT GGCGCCTGGT TGCGCCACGC TGAAGTGGCC CGCACCGTGG TCGAGAACAA CTGCTCCTGC GGCAGCGAAC ACGAGACGAT GCAAGTGCTG ACCAAAGAGA ACGTCATCGC CCAGCTGCAT CACTTGCGCA CCCATCCTTC GGTGGCCTCG CGCCTGGCAG CCGGTGAGCT GTTCATTCAT GGTTGGGTGT ACGACATCGA GACCAGCAAG ATCGAAGCCT ACGACGCCGC CAGCGACAGC TTCCTGCCCT TGGCCGCGGG TGAACCCGTT CCCTGCGCCA CTCCGAGAGG CCGCTACTAA
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Protein sequence | MPVKDPSKVV PQVPAESADA ALKHIVDGFL RFHHDVFPDQ QELFKKLATA QTPRAMFITC ADSRIVPELI TQSSPGDLFV TRNVGNVVPP YGQMNGGVSS AIEYAVMALK VHHIIICGHS DCGAMRAVLN PQSLTKMPTV GAWLRHAEVA RTVVENNCSC GSEHETMQVL TKENVIAQLH HLRTHPSVAS RLAAGELFIH GWVYDIETSK IEAYDAASDS FLPLAAGEPV PCATPRGRY
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