| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_0096 |
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| Symbol | prlC |
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| ID | 1043578 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida KT2440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002947 |
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| Strand | + |
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| Start bp | 101180 |
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| End bp | 103231 |
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| Gene Length | 2052 bp |
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| Protein Length | 683 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637143468 |
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| Product | oligopeptidase A |
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| Protein accession | NP_742266 |
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| Protein GI | 26986841 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0339] Zn-dependent oligopeptidases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.32998 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.00599775 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | GTGACTGCGA ACAACCCGCT TCTGCAATCC CACGATCTGC CGCCCTTCTC GCAAATTCGT
GCCGAACACG TGTTGCCGGC GATCGAAGCG ATCCTGGCCG ACAACCGTAA AGCCATTGCC
GAGATCCTCG AAAAGCAGGG CAAGAACCCT ACATGGGCCG GCCTGGTGCT GGCCATGGAC
GAACTGAACG ACCGCCTGGG CGCCGCCTGG AGCCCGGTCA GCCACCTCAA TGCGGTGTGC
AACAGTGCCG AGTTGCGTGA GGCCTACGAG TCGTGCCTGC CGGCGTTGAG CGCCTACTCT
ACCGAACTGG GCCAGAACCG CGCGCTGTTC GAAGCCTACC AGGCGCTGAT CGACAGCCCT
GAGGCTGCCG GTTTCGACGT GGCGCAAAAG ACTATCCTCG AGCACGCCTT GCGTGACTTC
CGCCTGTCGG GTATCGACCT GCCGGCGGAC AAGCAGCAGC GTTACGCCGA AGTGCAGAGC
AAGCTCAGCG AGCTGGGCAG CCGTTTCTCC AATCAGCTGC TGGACGCCAC CCAGGCCTGG
ACCAAGCATG TTACCGACGA AGCTGCGCTG GCCGGCCTGA CCGATTCGGC CAAGGCGCAG
ATGGCCGCTG CAGCCCAGGC CAAGGGCCTG GACGGCTGGT TGATCACCCT TGAATTCCCC
AGCTACTACG CGGTGATGAC CTACGCCAGC GACCGCGCCC TGCGCGAAGA GCTATACGCC
GCCTACTGCA CCCGCGCCTC CGACCAGGGC CCGAATGCCG GCCAGTTCGA CAATGGCCCG
GTGATGCGCG AAATCCTCGA CCTGCGCCAG GAGCTGGCCG AACTGCTGGG CTACAAGAAC
TACGCCGAGC TGAGCCTGGC CACCAAGATG GCTGAGTCCA GCGACCAGGT GCTGAGCTTC
CTGCGTGACT TGGCCAAGCG TTCCAAGCCG TTCGCCGCCC AGGATCTGCA ACAGCTCAAG
GCCTACGCTG CCGAACAAGG CTGCCCCGAG CTGGCCAGCT GGGATGCCGG CTACTTTGGC
GAGAAGCTGC GCGAGCAGCG CTACAGTGTG TCGCAGGAAG CCCTGCGCGC CTACTTCCCG
ATCGACAAGG TGCTGGGCGG CCTGTTCAGC ATCGTGCAGC GCCTGTACGG CATCGAAATC
GCCGAGCTCA AAGGTTTCGA CAGCTGGCAC CCGGACGTAC GCCTGTTCGA GATCAAGGAA
AACGGTCAGC ACGTTGGCCG TTTCTTCTTC GACCTGTACG CCCGCGCCAA CAAGCGTGGC
GGCGCCTGGA TGGACGGCGC CCGTGACCGT CGCCGCACCG CCGGCGGCCA GCTGCAAAGC
CCGGTGGCCA ACCTGGTGTG CAACTTCACC CCGGCCGCGC CCCGCAAGCC CGCGCTGCTG
ACCCACGATG AAGTCACCAC CCTGTTCCAC GAATTCGGTC ACGGCCTGCA CCACATGCTG
ACCCGCATTG AGCATGCCGG CGTGTCCGGC ATCAACGGCG TGGCCTGGGA TGCGGTCGAG
CTGCCCAGCC AGTTCATGGA AAACTGGTGC TGGGAGCCGG AAGGCCTGGC ACTGATTTCT
GGTCACTACG AAACCGGCGC CGCCCTGCCC CAGGACCTGC TGGACAAGAT GCTGGCCGCA
AAAAACTTCC AGTCGGGCAT GATGATGGTG CGCCAGTTGG AGTTCTCGCT GTTCGATTTC
GAGCTGCACG CCAGCCATGG CGACGGCCGC AGCGTATTGC AGGTGCTCGA AGGTGTGCGT
GACGAGGTGT CGGTCATGCG CCCGCCGGCT TACAACCGCT TCCCCAACAG CTTTGCGCAC
ATTTTCGCGG GCGGTTACGC GGCGGGCTAC TACAGCTACA AGTGGGCCGA AGTGCTGTCG
GCTGACGCCT TCTCGCGCTT CGAGGAAGAA GGCGTGCTGA ACGCCGAGAC CGGCCGCGCC
TTCCGCGAGG CGATCCTGGC CCGTGGTGGT TCGCGCGAGC CGATGGAGCT GTTCGTCGAC
TTCCGTGGCC GTGAGCCTTC CATCGATGCA TTGCTGCGCC ACAGTGGTCT CACCGAGGAC
GCTGCAGCAT GA
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| Protein sequence | MTANNPLLQS HDLPPFSQIR AEHVLPAIEA ILADNRKAIA EILEKQGKNP TWAGLVLAMD
ELNDRLGAAW SPVSHLNAVC NSAELREAYE SCLPALSAYS TELGQNRALF EAYQALIDSP
EAAGFDVAQK TILEHALRDF RLSGIDLPAD KQQRYAEVQS KLSELGSRFS NQLLDATQAW
TKHVTDEAAL AGLTDSAKAQ MAAAAQAKGL DGWLITLEFP SYYAVMTYAS DRALREELYA
AYCTRASDQG PNAGQFDNGP VMREILDLRQ ELAELLGYKN YAELSLATKM AESSDQVLSF
LRDLAKRSKP FAAQDLQQLK AYAAEQGCPE LASWDAGYFG EKLREQRYSV SQEALRAYFP
IDKVLGGLFS IVQRLYGIEI AELKGFDSWH PDVRLFEIKE NGQHVGRFFF DLYARANKRG
GAWMDGARDR RRTAGGQLQS PVANLVCNFT PAAPRKPALL THDEVTTLFH EFGHGLHHML
TRIEHAGVSG INGVAWDAVE LPSQFMENWC WEPEGLALIS GHYETGAALP QDLLDKMLAA
KNFQSGMMMV RQLEFSLFDF ELHASHGDGR SVLQVLEGVR DEVSVMRPPA YNRFPNSFAH
IFAGGYAAGY YSYKWAEVLS ADAFSRFEEE GVLNAETGRA FREAILARGG SREPMELFVD
FRGREPSIDA LLRHSGLTED AAA
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