Gene PP_0085 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPP_0085 
Symbol 
ID1043566 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida KT2440 
KingdomBacteria 
Replicon accessionNC_002947 
Strand
Start bp94596 
End bp95084 
Gene Length489 bp 
Protein Length162 aa 
Translation table11 
GC content58% 
IMG OID637143457 
Producthypothetical protein 
Protein accessionNP_742255 
Protein GI26986830 
COG category[S] Function unknown 
COG ID[COG4575] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00144499 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
GTGATGATCG GTCATGAGTG CTCTCCATGG TTGACAGTGA GATTCAGCCT AGCAGCGCAG 
GCCTGGTTTA CCTGCGAGCG GTCACTGTCT GCGAAAGTTC GATCGCACTT TCACGCAGCC
CAAGGGTCGC AATCCTTACA GCCCATACTG CAAAGGAGAG TCAACATGCA CCGCAACTCG
CTGCGTAAAA CGTCCCTGGA AAGCATGGAA GCGGAGATCG AGAGCCTTCT GAAAAGCTTG
GAAAACCTCA AGCATGATGC GTCGGAAGAG TCCCAGAAGT CGGTGAAGGC AATCCGCAGC
AACGCTGAAA GCGCACTGCG TCATTCGCGC AGCCTACTGA GCGATGCGTA CGAGGAAGTG
AAGCAGCGCA CCCGCCAGAC CGGCAAAGCC ACCCGGGACT ACGCCCAGGA ACACCCCTAC
ACCACCGCCG GTGTGGCCAT TGGTGCGCTG GGCCTGCTGG CGGCCTACCT GATATGCAAG
CGAAACTAA
 
Protein sequence
MMIGHECSPW LTVRFSLAAQ AWFTCERSLS AKVRSHFHAA QGSQSLQPIL QRRVNMHRNS 
LRKTSLESME AEIESLLKSL ENLKHDASEE SQKSVKAIRS NAESALRHSR SLLSDAYEEV
KQRTRQTGKA TRDYAQEHPY TTAGVAIGAL GLLAAYLICK RN