Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PP_0085 |
Symbol | |
ID | 1043566 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida KT2440 |
Kingdom | Bacteria |
Replicon accession | NC_002947 |
Strand | - |
Start bp | 94596 |
End bp | 95084 |
Gene Length | 489 bp |
Protein Length | 162 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 637143457 |
Product | hypothetical protein |
Protein accession | NP_742255 |
Protein GI | 26986830 |
COG category | [S] Function unknown |
COG ID | [COG4575] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 4 |
Fosmid unclonability p-value | 0.00144499 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | GTGATGATCG GTCATGAGTG CTCTCCATGG TTGACAGTGA GATTCAGCCT AGCAGCGCAG GCCTGGTTTA CCTGCGAGCG GTCACTGTCT GCGAAAGTTC GATCGCACTT TCACGCAGCC CAAGGGTCGC AATCCTTACA GCCCATACTG CAAAGGAGAG TCAACATGCA CCGCAACTCG CTGCGTAAAA CGTCCCTGGA AAGCATGGAA GCGGAGATCG AGAGCCTTCT GAAAAGCTTG GAAAACCTCA AGCATGATGC GTCGGAAGAG TCCCAGAAGT CGGTGAAGGC AATCCGCAGC AACGCTGAAA GCGCACTGCG TCATTCGCGC AGCCTACTGA GCGATGCGTA CGAGGAAGTG AAGCAGCGCA CCCGCCAGAC CGGCAAAGCC ACCCGGGACT ACGCCCAGGA ACACCCCTAC ACCACCGCCG GTGTGGCCAT TGGTGCGCTG GGCCTGCTGG CGGCCTACCT GATATGCAAG CGAAACTAA
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Protein sequence | MMIGHECSPW LTVRFSLAAQ AWFTCERSLS AKVRSHFHAA QGSQSLQPIL QRRVNMHRNS LRKTSLESME AEIESLLKSL ENLKHDASEE SQKSVKAIRS NAESALRHSR SLLSDAYEEV KQRTRQTGKA TRDYAQEHPY TTAGVAIGAL GLLAAYLICK RN
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