| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_0084 |
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| Symbol | trpI |
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| ID | 1043565 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida KT2440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002947 |
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| Strand | + |
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| Start bp | 93703 |
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| End bp | 94599 |
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| Gene Length | 897 bp |
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| Protein Length | 298 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 637143456 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | NP_742254 |
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| Protein GI | 26986829 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 4 |
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| Fosmid unclonability p-value | 0.00162977 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGCCCACG ACCTCCCTCC CCTCAATGCC CTGCGCGCCT TCGAGGCTAC AGCCAGGCTG
AACAGTGTCA GCCAGGCGGC GGAAGCGCTG CACGTCACCC ACGGCGCTGT CAGCCGGCAG
ATCAAGGTGC TTGAGGAGCA TCTGGGCGTA GCCCTGTTCG TCAAGGACGG GCGTGGCATC
AAACTCACAG ATGCCGGTAT GCGTCTGCGC GATGCCAGCG GTGAGGCCTT CGACCGGCTG
CGCAGCGTGT GTTCCGAGCT CAGCCGTGAT GTGAGCGAGG CGCCATTCGT GCTGGGCTGC
TCGGGCAGCC TGCTGGCGCG GTGGTTTATT CCGCGGCTGG GGCGGTTGCA GGCGGATTTG
CCTGAGCTGC GCTTGCACCT GTCGGCGGGT GAGGGCGACC TTGACCCGCG GCGGCCCGGG
CTGGATGCGT TGCTGGTGTA TGCCGAGCCA CCGTGGCCAG CGGACATGCA GGTGCATGTG
CTGGCCGAGG AATGCATCGG GCCGGTGCTC AGCCCGCATT TCGCAGGTTT CCAGCGCTTG
CAGGGCGCGC CCGCCAAGGC ACTGCTGGGC GAAGCCTTGC TGCACACCAC GTCACGCCCA
CAAGCCTGGC CGACCTGGGT GGTGCAACAG GGCCTGGAGC CGGCGGCCAT TCACTATGGC
CAGGCCTTCG AGCACCTGTA TTACCTGCTG GAGGCTGCCG TGGCCGGATT GGGCGTGGCG
ATAGCACCGC AGCCGCTGGT CGCCGATGAC CTGCGGGCGG GCCGATTGAG TGCGCCTTGG
GGCTTTTCAC CTACCCAGGC GGCGCTGGCA TTGTGGGTGC CACGGCGCGC CGCAGACGGG
CGCGCCGAGC AGTTGGCGCA GTGGTTAAGG GCGGAACTTG CGCGGCAGAG CGCTTAG
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| Protein sequence | MAHDLPPLNA LRAFEATARL NSVSQAAEAL HVTHGAVSRQ IKVLEEHLGV ALFVKDGRGI
KLTDAGMRLR DASGEAFDRL RSVCSELSRD VSEAPFVLGC SGSLLARWFI PRLGRLQADL
PELRLHLSAG EGDLDPRRPG LDALLVYAEP PWPADMQVHV LAEECIGPVL SPHFAGFQRL
QGAPAKALLG EALLHTTSRP QAWPTWVVQQ GLEPAAIHYG QAFEHLYYLL EAAVAGLGVA
IAPQPLVADD LRAGRLSAPW GFSPTQAALA LWVPRRAADG RAEQLAQWLR AELARQSA
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